| Protein: | MYB32_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 274 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for MYB32_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
303.0 | [0..1] | [274..1] |
|
Region A: Residues: [1-132] |
1 11 21 31 41 51
| | | | | |
1 MGRSPCCEKD HTNKGAWTKE EDDKLISYIK AHGEGCWRSL PRSAGLQRCG KSCRLRWINY 60
61 LRPDLKRGNF TLEEDDLIIK LHSLLGNKWS LIATRLPGRT DNEIKNYWNT HVKRKLLRKG 120
121 IDPATHRPIN ET
|
| Detection Method: |  |
| Confidence: | 31.0 |
| Match: | 1a5jA |
| Description: | CHICKEN B-MYB DNA BINDING DOMAIN, REPEAT 2 AND REPEAT3, NMR, 32 STRUCTURES |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.334577365229545 | bayes_pls_golite062009 |
| transcription regulator activity | 0.0696342306231097 | bayes_pls_golite062009 |
|
Region A: Residues: [133-218] |
1 11 21 31 41 51
| | | | | |
1 KTSQDSSDSS KTEDPLVKIL SFGPQLEKIA NFGDERIQKR VEYSVVEERC LDLNLELRIS 60
61 PPWQDKLHDE RNLRFGRVKY RCSACR
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.626 | N/A | N/A | a.4.1 | Homeodomain-like |
| View | Download | 0.624 | N/A | N/A | a.28.1 | ACP-like |
| View | Download | 0.570 | N/A | N/A | d.39.1 | Dynein light chain 8 (DLC8) |
| View | Download | 0.527 | N/A | N/A | a.180.1 | N-terminal, cytoplasmic domain of anti-sigmaE factor RseA |
| View | Download | 0.500 | N/A | N/A | a.4.5 | "Winged helix" DNA-binding domain |
|
Region A: Residues: [219-274] |
1 11 21 31 41 51
| | | | | |
1 FGFGNGKECS CNNVKCQTED SSSSSYSSTD ISSSIGYDFL GLNNTRVLDF STLEMK
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.818 | N/A | N/A | g.18.1 | Complement control module/SCR domain |
| View | Download | 0.742 | N/A | N/A | d.50.1 | dsRNA-binding domain-like |
| View | Download | 0.740 | N/A | N/A | g.41.3 | Zinc beta-ribbon |
| View | Download | 0.711 | N/A | N/A | d.9.2 | Description not found. |
| View | Download | 0.703 | N/A | N/A | d.50.1 | dsRNA-binding domain-like |
