| Protein: | DNJA6_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 442 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for DNJA6_ARATH.
| Description | E-value | Query Range |
Subject Range |
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435.0 | [0..1] | [442..1] |
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372.0 | [0..1] | [440..1] |
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370.0 | [0..1] | [429..1] |
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364.0 | [0..81] | [441..1] |
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352.0 | [0..82] | [442..1] |
|
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352.0 | [0..82] | [441..1] |
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351.0 | [0..82] | [441..1] |
|
Region A: Residues: [1-81] |
1 11 21 31 41 51
| | | | | |
1 MAIIQLGSTC VAQWSIRPQF AVRAYYPSRI ESTRHQNSSS QVNCLGASKS SMFSHGSLPF 60
61 LSMTGMSRNM HPPRRGSRFT V
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.566 | a.74.1 | Cyclin-like |
| View | Download | 0.566 | a.74.1 | Cyclin-like |
| View | Download | 0.561 | a.57.1 | Protein HNS-dependent expression A; HdeA |
| View | Download | 0.561 | a.57.1 | Protein HNS-dependent expression A; HdeA |
| View | Download | 0.561 | f.34.1 | Mechanosensitive channel protein MscS (YggB), transmembrane region |
| View | Download | 0.550 | a.74.1 | Cyclin-like |
| View | Download | 0.550 | a.74.1 | Cyclin-like |
| View | Download | 0.516 | a.118.1 | ARM repeat |
| View | Download | 0.485 | a.3.1 | Cytochrome c |
| View | Download | 0.417 | a.16.1 | S15/NS1 RNA-binding domain |
| View | Download | 0.390 | a.74.1 | Cyclin-like |
| View | Download | 0.353 | a.16.1 | S15/NS1 RNA-binding domain |
| View | Download | 0.344 | a.74.1 | Cyclin-like |
|
Region A: Residues: [82-182] |
1 11 21 31 41 51
| | | | | |
1 RADADYYSVL GVSKNATKAE IKSAYRKLAR NYHPDVNKDP GAEEKFKEIS NAYEVLSDDE 60
61 KKSLYDRYGE AGLKGAAGFG NGDFSNPFDL FDSLFEGFGG G
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| Detection Method: | |
| Confidence: | 19.69897 |
| Match: | 1bq0A |
| Description: | J-DOMAIN (RESIDUES 1-77) OF THE ESCHERICHIA COLI N-TERMINAL FRAGMENT (RESIDUES 1-104) OF THE MOLECULAR CHAPERONE DNAJ, NMR, 20 STRUCTURES |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [183-442] |
1 11 21 31 41 51
| | | | | |
1 MGRGSRSRAV DGQDEYYTLI LNFKEAVFGM EKEIEISRLE SCGTCEGSGA KPGTKPTKCT 60
61 TCGGQGQVVS AARTPLGVFQ QVMTCSSCNG TGEISTPCGT CSGDGRVRKT KRISLKVPAG 120
121 VDSGSRLRVR GEGNAGKRGG SPGDLFVVIE VIPDPILKRD DTNILYTCKI SYIDAILGTT 180
181 LKVPTVDGTV DLKVPAGTQP STTLVMAKKG VPVLNKSNMR GDQLVRVQVE IPKRLSKEEK 240
241 KLIEELADMS KNKTANSTSR
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| Detection Method: | |
| Confidence: | 46.0 |
| Match: | 1nltA |
| Description: | The crystal structure of Hsp40 Ydj1 |
Matching Structure (courtesy of the PDB): |
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