| Protein: | gi|17979181, gi|... |
| Organism: | Arabidopsis thaliana |
| Length: | 455 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|17979181, gi|....
| Description | E-value | Query Range |
Subject Range |
|
|
275.0 | [0..2] | [450..847] |
|
Region A: Residues: [1-245] |
1 11 21 31 41 51
| | | | | |
1 MDESWRMKMG LSVDPFFSIA RKSMDARIDA EDFADVFGGP PRSVLTRKFS GDFSRSDCFY 60
61 DEIFQPPGTF SSGGSLASSK SHGRNLPAFR IPSGGEGFYD GVFGGRGGSA KEGSKKQSSM 120
121 TKPRSNSSSM LSSEEASPHY PPPAAASGDD SGFSSFTSRL RPLNVPSRSH KRESKKQSFS 180
181 AVPKAKDSFS GQNNTPEKAD FYYKKTHFGG SRRASPETIS LDPNSFRRMD DYGPSSPASS 240
241 PVSSF
|
| Detection Method: |  |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [246-455] |
1 11 21 31 41 51
| | | | | |
1 ICEEEDDNTH AKQRTNRDCK VEEVVVEDEE DEEEEEMSSY VIEINSDRFD RYREEGGGGG 60
61 GNSDSNDMDE AIAWAKERSQ RPEAKQTEED VIDSRRSEEE PKSEEEMEME MKDEEIRIWL 120
121 TGKETNIRLL LSTLHHVLWS NSNWDSIPLA NLRDGSQVKK AYQRARLCLH PDKLQQRGGT 180
181 SPIQKSVASR VFAILQEAWA VYVTNEGLSS
|
| Detection Method: | |
| Confidence: | 52.0 |
| Match: | 1n4cA |
| Description: | NMR Structure of the J-Domain and Clathrin Substrate Binding Domain of Bovine Auxilin |
Matching Structure (courtesy of the PDB): |
|
