| Protein: | DCAM3_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 349 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for DCAM3_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
510.0 | [0..1] | [349..5] |
|
Region A: Residues: [1-68] |
1 11 21 31 41 51
| | | | | |
1 MAVSATGFEG FEKRLEISFF ETTDFLDPQG KSLRSLTKSQ LDEILTPAEC TIVSSLTNSF 60
61 VDSYVLSE
|
| Detection Method: |  |
| Confidence: | 22.0 |
| Match: | 1mhmB |
| Description: | S-adenosylmethionine decarboxylase |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [69-349] |
1 11 21 31 41 51
| | | | | |
1 SSLFVYPYKI IIKTCGTTKL LLSIPHILRL ADSLCLTVKS VRYTRGSFIF PGAQSYPHRS 60
61 FSEEVALLDD YFGKLNAGSK AFVMGGSDNN PQRWHVYSAS STEESAVCDK PVYTLEMCMT 120
121 GLDNIKASVF FKTNSVSASE MTISSGIRNI LPGSEICDFN FEPCGYSMNS IEGDAVSTIH 180
181 VTPEDGFSYA SFETVGYDLK ALNFKELVDR VLVCFGPEEF SVAVHANLGT EVLASDCVAD 240
241 VNGYFSQERE LEELGLGGSV LYQRFVKTVE CCSPKSTLGF C
|
| Detection Method: | |
| Confidence: | 113.0 |
| Match: | 1mhmA |
| Description: | Crystal structure of S-adenosylmethionine decarboxylase from potato |
| Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| adenosylmethionine decarboxylase activity | 6.97190143843809 | bayes_pls_golite062009 |
| carbon-carbon lyase activity | 2.68228786608236 | bayes_pls_golite062009 |
| carboxy-lyase activity | 1.55250570844159 | bayes_pls_golite062009 |
| binding | 1.4725833406744 | bayes_pls_golite062009 |
| catalytic activity | 1.25843830926101 | bayes_pls_golite062009 |
| lyase activity | 0.834955527171148 | bayes_pls_golite062009 |
| protein binding | 0.443666756110255 | bayes_pls_golite062009 |
