Protein: | MYB30_ARATH |
Organism: | Arabidopsis thaliana |
Length: | 323 amino acids |
Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for MYB30_ARATH.
Description | E-value | Query Range |
Subject Range |
|
277.0 | [0..1] | [323..1] |
Region A: Residues: [1-147] |
1 11 21 31 41 51 | | | | | | 1 MVRPPCCDKG GVKKGPWTPE EDIILVTYIQ EHGPGNWRAV PTNTGLLRCS KSCRLRWTNY 60 61 LRPGIKRGNF TEHEEKMIVH LQALLGNRWA AIASYLPQRT DNDIKNYWNT HLKKKLNKVN 120 121 QDSHQELDRS SLSSSPSSSS ANSNSNI |
Detection Method: | |
Confidence: | 36.0 |
Match: | 1h88C |
Description: | c-Myb, DNA-binding domain |
Matching Structure (courtesy of the PDB): |
Term | Confidence | Notes |
binding | 0.334577365229545 | bayes_pls_golite062009 |
transcription regulator activity | 0.0696342306231097 | bayes_pls_golite062009 |
Region A: Residues: [148-323] |
1 11 21 31 41 51 | | | | | | 1 SRGQWERRLQ TDIHLAKKAL SEALSPAVAP IITSTVTTTS SSAESRRSTS SASGFLRTQE 60 61 TSTTYASSTE NIAKLLKGWV KNSPKTQNSA DQIASTEVKE VIKSDDGKEC AGAFQSFSEF 120 121 DHSYQQAGVS PDHETKPDIT GCCSNQSQWS LFEKWLFEDS GGQIGDILLD ENTNFF |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.