| Protein: | BBD1_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 325 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for BBD1_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
429.0 | [0..1] | [325..1] |
|
|
370.0 | [0..3] | [320..2] |
|
|
337.0 | [0..1] | [320..1] |
|
|
286.0 | [0..3] | [237..2] |
|
|
252.0 | [0..85] | [320..94] |
|
|
237.0 | [0..115] | [319..1] |
|
|
231.0 | [0..115] | [319..1] |
|
Region A: Residues: [1-116] |
1 11 21 31 41 51
| | | | | |
1 MRSVQAPVVC PAIRPRQVGA CASLVNYTGL KPRSQFWGNR TKGVKSQGTT TTITLRLCNK 60
61 SIKCVFSSHS DGNGSTAENF NENDEEYVNS SVVEAVEVKS GADGFMVKMR DGRQLR
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [117-266] |
1 11 21 31 41 51
| | | | | |
1 CVHNNPQGGH LPDYAPHPAI VLKMEDGTGL LLPIIVLEMP SVLLMAAMTN VQIARPTMYQ 60
61 VVKEMVDKMG YEVRLVRVTK RVHEAYFAQL FLSKVGNASE CVSFDLRPSD AINIAVRCKI 120
121 PIQVNKYLAY SDGMRVIESG KISTPAPASD
|
| Detection Method: | |
| Confidence: | 35.69897 |
| Match: | 1sj5A |
| Description: | CRYSTAL STRUCTURE OF C38A MUTANT OF HYPOTHETICAL PROTEIN (TM0160) FROM THERMOTOGA MARITIMA AT 2.8 A RESOLUTION |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [267-325] |
1 11 21 31 41 51
| | | | | |
1 GLLFTEQDRP NGQACLDTKE FNILSKMMQA VDEERYDEAA EWRDKLGQFR AKRNLRKYT
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
