| Protein: | ATB20_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 286 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ATB20_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
163.0 | [0..16] | [286..1] |
|
Region A: Residues: [1-157] |
1 11 21 31 41 51
| | | | | |
1 MYVFDPTTEA GLRLEMAFPQ HGFMFQQLHE DNSQDQLPSC PPHLFNGGGN YMMNRSMSLM 60
61 NVQEDHNQTL DEENLSDDGA HTMLGEKKKR LQLEQVKALE KSFELGNKLE PERKIQLAKA 120
121 LGMQPRQIAI WFQNRRARWK TRQLERDYDS LKKQFES
|
| Detection Method: |  |
| Confidence: | 20.69897 |
| Match: | 1b72A |
| Description: | Homeobox protein hox-b1 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.334577365229545 | bayes_pls_golite062009 |
| transcription regulator activity | 0.0696342306231097 | bayes_pls_golite062009 |
|
Region A: Residues: [158-286] |
1 11 21 31 41 51
| | | | | |
1 LKSDNASLLA YNKKLLAEVM ALKNKECNEG NIVKREAEAS WSNNGSTENS SDINLEMPRE 60
61 TITTHVNTIK DLFPSSIRSS AHDDDHHQNH EIVQEESLCN MFNGIDETTP AGYWAWSDPN 120
121 HNHHHHQFN
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
