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View Structure Prediction Details

Protein: CLPR2_ARATH
Organism: Arabidopsis thaliana
Length: 279 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CLPR2_ARATH.

Description E-value Query
Range
Subject
Range
gi|16209712 - gi|16209712|gb|AAL14412.1| At1g12410/F5O11_7 [Arabidopsis thaliana]
265.0 [0..1] [279..1]

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Predicted Domain #1
Region A:
Residues: [1-279]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAVSFNTTLH QPSLSPSCSI KLYSGLKPQS ASFLASGYQN LNKEFYGRVY KSLQSGTGKA  60
   61 SRSRVKMMPI GTPRVPYRNR EEGTWQWVDI WNALYRERVI FIGQNIDEEF SNQILATMLY 120
  121 LDTLDDSRRI YMYLNGPGGD LTPSLAIYDT MKSLKSPVGT HCVGLAYNLA GFLLAAGEKG 180
  181 HRFAMPLSRI ALQSPAGAAR GQADDIQNEA KELSRIRDYL FNELAKNTGQ PAERVFKDLS 240
  241 RVKRFNAEEA IEYGLIDKIV RPPRIKEDAP RQDESAGLG

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 55.69897
Match: 1tg6A
Description: Crystallography and mutagenesis point to an essential role for the N-terminus of human mitochondrial ClpP
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 1.46154163027498 bayes_pls_golite062009
enoyl-CoA hydratase activity 1.27969156772229 bayes_pls_golite062009
CoA carboxylase activity 0.939626895227199 bayes_pls_golite062009
acetyl-CoA carboxylase activity 0.764444938444292 bayes_pls_golite062009
ligase activity, forming carbon-carbon bonds 0.621229080200493 bayes_pls_golite062009
binding 0.578223105269736 bayes_pls_golite062009
hydrolase activity 0.534319520590169 bayes_pls_golite062009
ligase activity 0.32092496884003 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle