| Protein: | C3H30_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 716 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for C3H30_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
399.0 | [0..1] | [442..19] |
|
Region A: Residues: [1-378] |
1 11 21 31 41 51
| | | | | |
1 MCCGSDRLNQ IVSSRSSLPI SFEEDNNLVT NTDMNHLTVE TEDTFASLLE LAANNDVEGV 60
61 RLSIERDPSC VDEAGLWYGR QKGSKAMVND YRTPLMVAAT YGSIDVIKLI VSLTDADVNR 120
121 ACGNDQTTAL HCAASGGAVN AIQVVKLLLA AGADLNLLDA EGQRAGDVIV VPPKLEGVKL 180
181 MLQELLSADG SSTAERNLRV VTNVPNRSSS PCHSPTGENG GSGSGSPLGS PFKLKSTEFK 240
241 KEYPVDPSLP DIKNSIYATD EFRMYSFKVR PCSRAYSHDW TECPFVHPGE NARRRDPRKF 300
301 HYSCVPCPDF RKGACRRGDM CEYAHGVFEC WLHPAQYRTR LCKDGTGCAR RVCFFAHTPE 360
361 ELRPLYASTG SAVPSPRS
|
| Detection Method: |  |
| Confidence: | 70.69897 |
| Match: | 1n11A |
| Description: | Ankyrin-R |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [379-445] |
1 11 21 31 41 51
| | | | | |
1 NADYAAALSL LPGSPSGVSV MSPLSPSAAG NGMSHSNMAW PQPNVPALHL PGSNLQSSRL 60
61 RSSLNAR
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.558 | a.48.3 | Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 |
| View | Download | 0.558 | a.48.3 | Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 |
| View | Download | 0.242 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.242 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.231 | a.46.2 | Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain |
| View | Download | 0.231 | a.46.2 | Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain |
| View | Download | 0.229 | a.46.2 | Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain |
| View | Download | 0.221 | a.35.1 | lambda repressor-like DNA-binding domains |
|
Region A: Residues: [446-716] |
1 11 21 31 41 51
| | | | | |
1 DIPTDEFNML ADYEQQQLLN EYSNALSRSG RMKSMPPSNL EDLFSAEGSS SPRFTDSALA 60
61 SAVFSPTHKS AVFNQFQQQQ QQQQSMLSPI NTSFSSPKSV DHSLFSGGGR MSPRNVVEPI 120
121 SPMSARVSML AQCVKQQQQQ QQQQQQQHQF RSLSSRELRT NSSPIVGSPV NNNTWSSKWG 180
181 SSNGQPDWGM SSEALGKLRS SSSFDGDEPD VSWVQSLVKE TPAEAKEKAA TSSSGEHVMK 240
241 QPNPVEPVMD HAGLEAWIEQ MQLDQLVAQQ N
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
