Protein: | DRP3B_ARATH |
Organism: | Arabidopsis thaliana |
Length: | 780 amino acids |
Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for DRP3B_ARATH.
Description | E-value | Query Range |
Subject Range |
|
675.0 | [0..19] | [774..2] |
Region A: Residues: [1-336] |
1 11 21 31 41 51 | | | | | | 1 MSVDDLPPSS ASAVTPLGSS VIPIVNKLQD IFAQLGSQST IALPQVAVVG SQSSGKSSVL 60 61 EALVGRDFLP RGNDICTRRP LRLQLVQTKP SSDGGSDEEW GEFLHHDPVR RIYDFSEIRR 120 121 EIEAETNRVS GENKGVSDIP IGLKIFSPNV LDISLVDLPG ITKVPVGDQP SDIEARIRTM 180 181 ILTYIKEPSC LILAVSPANT DLANSDALQI AGNADPDGHR TIGVITKLDI MDRGTDARNH 240 241 LLGKTIPLRL GYVGVVNRSQ EDILMNRSIK DALVAEEKFF RSRPVYSGLT DRLGVPQLAK 300 301 KLNQVLVQHI KALLPSLKSR INNALFATAK EYESYG |
Detection Method: | |
Confidence: | 94.30103 |
Match: | 2akaB |
Description: | Structure of the nucleotide-free myosin II motor domain from Dictyostelium discoideum fused to the GTPase domain of dynamin 1 from Rattus norvegicus |
Matching Structure (courtesy of the PDB): |
Region A: Residues: [337-565] |
1 11 21 31 41 51 | | | | | | 1 DITESRGGQG ALLLSFITKY CEAYSSTLEG KSKEMSTSEL SGGARILYIF QSVFVKSLEE 60 61 VDPCEDLTAD DIRTAIQNAT GPRSALFVPD VPFEVLVRRQ ISRLLDPSLQ CARFIFDELV 120 121 KISHQCMMKE LQRFPVLQKR MDEVIGNFLR EGLEPSQAMI RDLIEMEMDY INTSHPNFIG 180 181 GTKAVEQAMQ TVKSSRIPHP VARPRDTVEP ERTASSGSQI KTRSFLGRQ |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
Region A: Residues: [566-628] |
1 11 21 31 41 51 | | | | | | 1 ANGIITDQAV PTAADAERPA PAGSTSWSGF SSIFRGSDGQ AAAKNNLLNK PFSETTQEVY 60 61 QNL |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
MCM Score |
SCOP Match |
SCOP Description | ||
View | Download | 0.553 | a.60.1 | SAM/Pointed domain |
View | Download | 0.318 | a.35.1 | lambda repressor-like DNA-binding domains |
View | Download | 0.295 | a.189.1 | Description not found. |
View | Download | 0.294 | a.64.2 | Bacteriocin AS-48 |
View | Download | 0.293 | a.118.1 | ARM repeat |
View | Download | 0.242 | a.4.1 | Homeodomain-like |
View | Download | 0.227 | a.56.1 | CO dehydrogenase ISP C-domain like |
View | Download | 0.216 | a.64.2 | Bacteriocin AS-48 |
View | Download | 0.215 | a.52.1 | Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin |
Region A: Residues: [629-780] |
1 11 21 31 41 51 | | | | | | 1 STIYLKEPPT ILKSSETHSE QESVEIEITK LLLKSYYDIV RKNVEDLVPK AIMHFLVNYT 60 61 KRELHNVFIE KLYRENLIEE LLKEPDELAI KRKRTQETLR ILQQANRTLD ELPLEAESVE 120 121 RGYKIGSEAK HEELPGTRRS RTETNGNGRL HM |
Detection Method: | |
Confidence: | 38.275724 |
Match: | PF02212.9 |
Description: | No description for PF02212.9 was found. |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.