| Protein: | RH40_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 1088 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for RH40_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
384.0 | [0..373] | [914..10] |
|
Region A: Residues: [1-208] |
1 11 21 31 41 51
| | | | | |
1 MATTEDTPAS AGPRYAPEDP TLPQPWKGLI DGSTGILYYW NPETNVTQYE RPSAPPPHSA 60
61 TTPKLAQIPV PSSGQGHQAQ HEQAKPVGHV SQQHGFQQQP QQFPSQHVRP QMMQQHPAQQ 120
121 MPQQSGQQFP QQQSQSMVPH PHGHPSVQTY QPTTQQQQQG MQNQHSQMPQ QLSHQYAHSQ 180
181 QHYMGFRPHM QTQGLQNSHQ TPQGGPHG
|
| Detection Method: |  |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [209-390] |
1 11 21 31 41 51
| | | | | |
1 QQFPSQQEYN SLAPKREGDE FHGGKKTGFS QPHLPNSERS PSQNTHFEAN AASQKTNANL 60
61 AMAQKCNGPQ ANAAVTQFQQ PGANLIHQQL GPRAPNQMDQ TMLHQKSHVS PFQSNNTYEN 120
121 NLQSRPGNDS YVNMRMEVPV RGAQPLHPAA MPKDIRISGG PPTNADPAMG QTGHGTYGHA 180
181 GP
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [391-820] |
1 11 21 31 41 51
| | | | | |
1 AFPNKSLVRP HFVTSPDVPH LSPVEIYRKQ HEVTTTGENI PAPYITFESS GLPPEILREL 60
61 LSAGFPSPTP IQAQTWPIAL QSRDIVAIAK TGSGKTLGYL IPAFILLRHC RNDSRNGPTV 120
121 LILAPTRELA TQIQDEALRF GRSSRISCTC LYGGAPKGPQ LKELERGADI VVATPGRLND 180
181 ILEMKMIDFQ QVSLLVLDEA DRMLDMGFEP QIRKIVNEIP PRRQTLMYTA TWPKEVRKIA 240
241 SDLLVNPVQV NIGRVDELAA NKAITQYVEV VPQMEKERRL EQILRSQERG SKVIIFCSTK 300
301 RLCDHLARSV GRHFGAVVIH GDKTQGERDW VLNQFRSGKS CVLIATDVAA RGLDIKDIRV 360
361 VINYDFPTGV EDYVHRIGRT GRAGATGVAF TFFTEQDWKY APDLIKVLEG ANQQVPPQVR 420
421 DIAMRGGGGG
|
| Detection Method: | |
| Confidence: | 102.0 |
| Match: | 2i4iA |
| Description: | No description for 2i4iA was found. |
|
Region A: Residues: [821-909] |
1 11 21 31 41 51
| | | | | |
1 GPGYSQDRRG MVNRFDSGGG GTRWDSGGGF GGRGGGFSGR EGGFGGREGG FGGREGGFGG 60
61 RGGRFGMRDD SFGRGGNRGR GFTGPDAGH
|
| Detection Method: | |
| Confidence: | 20.69897 |
| Match: | 1d9xA |
| Description: | Nucleotide excision repair enzyme UvrB |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [910-1088] |
1 11 21 31 41 51
| | | | | |
1 MNVGGRGGFG RFGNNNNMES RGFGRGSGRG FGRGVGRFDN RRGRSRSRSP DLVRPRRRSS 60
61 SYSRSRSRSG SYSRSRSRSR SWSRSRSRSP RHSRDRGGHN RSRSYSRSPS PVYERRDRAP 120
121 RVSGFDIKPP VESVVNLDMN AAAAIENVVP TSLSERQGNG VVESEVEAAL VRPVVDEEP
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
