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View Structure Prediction Details

Protein: BIG2_ARATH
Organism: Arabidopsis thaliana
Length: 1793 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

No multiple sequence alignment data found for BIG2_ARATH.

Predicted Domain #1
Region A:
Residues: [1-225]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASSEADSRL SRVVTPALEK IVKNASWRKH SKLANECKAV IERLNSLQKS PPPSSSAATD  60
   61 SESESSVPGP LNDGGSIEYS LADSELIFSP LINACGTGLA KIIEPAIDCI QKLIAHGYIR 120
  121 GESDPSGGAE SLLLFKLIDS VCKCHDLGDE SIELPVLKTL LSAINSISLR IHGKCLLLVV 180
  181 RTCYDIYLGS KNVVNQTTAK ASLIQILVIV FRRMEADSST VPIQP

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [226-339]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 IVVAELMEPL EKSDADGTMT QFVQGFITKI MQDIDGVLNP TMSGSGSGSG SGGQDGAYGT  60
   61 TTVETTNPTD LLDSTDKDML DAKYWEISMY KSALEGRKGE LTDGDAERDD DLEV

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [340-600]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 QIENKLRRDA CLVFRALCKL SMKAPPKESS ADPQSMRGKI LALELLKILL ENAGAVFRTS  60
   61 EKFSADIKQF LCLSLLKNSA STLMIIFQLS CSIFISLVAR FRAGLKAEIG VFFPMIVLRV 120
  121 VENVAQPNFQ QKMIVLRFLD KLCLDSQILV DIFLNYDCDV NSSNIFERMV NGLLKTAQGV 180
  181 PPGTATTLMP PQEAAMKLEA MKCLVAILKS MGDWLNKQLR LPVSNSLNKS DVIEIDLGPG 240
  241 SPQLANGNAD ESADGSDTYS E

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [601-962]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SSGGTSDALA IEQRRAYKLE LQEGISLFNR KPTKGIEFLI NAGKVGESPE EIAGFLKDAS  60
   61 GLNKTLIGDY LGEREDLALK VMHAYVDSFD FRGMEFDEAI RTFLEGFRLP GEAQKIDRIM 120
  121 EKFAERYCKC NPKVFTSADS AYVLAYSVIM LNTDAHNPMV KNKMSADDFI RNNRGIDDGK 180
  181 DLPADYMRSL YERITKHEIK MKEDDLRLQQ KQYANSNRML GLDGILNIVI RKQWGDSYAE 240
  241 TSDDLMKHMQ EQFKEKARKS ESTYYAATDV VILRFMIEAC WAPMLAAFSV PLDQSDDLIV 300
  301 INICLEGFHH AIHATSLMSM KTHRDAFVTS LAKFTSLHSP ADIKQRNIEA IKAILRLADE 360
  361 EG

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 84.221849
Match: 2r0dA
Description: No description for 2r0dA was found.

Predicted Domain #5
Region A:
Residues: [963-1051]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 NYLQDAWEHI LTCVSRFEQL HLLGEGAPPD ATFFASKQNE SEKSKQPKQY ILPVLKRKGP  60
   61 GKSQYAATGV LRGSYDSMSL GGKGSKNVR

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #6
Region A:
Residues: [1052-1234]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 QEQMSSIVSN LNLLEQVGEM NQVFSQSQKL NSEAIIDFVK ALCKVSMDEL RSPSNPRVFS  60
   61 LTKIVEIAHY NMNRIRLVWS SIWQVLSGFF VTIGCSENLS IAIFAMDSLR QLSMKFLERE 120
  121 ELANYNFQNE FMTPFVIVMR RSNDVEIREL IIRCVSQMVL SRVNNVKSGW KSMFMVFTTA 180
  181 AYD

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #7
Region A:
Residues: [1235-1361]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DHKNIVFLSF EIIEKIIREY FPYITETETT TFTDCVNCLV AFTNNRFSKD ISLSSIAFLR  60
   61 YCATKLAEGD LNSPSTNKYK GTSGKIPQSS LHSGKSGKQE NGEIVNNNHL YFWFPLLSGL 120
  121 SELSFDP

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #8
Region A:
Residues: [1362-1549]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 RPEIRKSALQ IMFDTLRNHG HLFSLPLWEK VFESVLFPIF DYVRHSIDPS GEDESADQGS  60
   61 SGGEVDELDH DAWLYETCTL ALQLVVDLFV KFYTTVNPLL EKVLMLLVSF IKRPHQSLAG 120
  121 IGIAAFVRLM SDADGLFSEE KWLEVVSALK EAAKTTCPDF SYFLSEEYVA RSQRSALNIQ 180
  181 NSNAESAA

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #9
Region A:
Residues: [1550-1620]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PTATDGNEES QRTATHLYAA ISDAKCRAAV QLLLIQAVME IYNMYRPQLS AKNTLVLVDA  60
   61 LHGVALHAHG I

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #10
Region A:
Residues: [1621-1793]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 NSNTILRSRL QELGPMTQMQ DPPLLRLENE SYQICLTFLQ NLVADKTKKE EEEEEEEIES  60
   61 LLVNICQEVL NFYIETSSSA KKLQSESSRA SEYRWRIPLG SGKRRELSAR APLIVATLQA 120
  121 MCTLDEASFE KNLKCLFPLL ANLISCEHGS NEVQTALADM LGLSVGPVLL QWC

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle