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View Structure Prediction Details

Protein: PP429_ARATH
Organism: Arabidopsis thaliana
Length: 588 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PP429_ARATH.

Description E-value Query
Range
Subject
Range
gi|54695180 - gi|54695180|dbj|BAD67155.1| PPR986-12 [Physcomitrella patens]
648.0 [0..1] [588..399]

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Predicted Domain #1
Region A:
Residues: [1-588]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MALNSSAFFV PCHNYNQICD LLLSSARTRS TIKGLQLHGY VVKSGLSLIP LVANNLINFY  60
   61 SKSQLPFDSR RAFEDSPQKS STTWSSIISC FAQNELPWMS LEFLKKMMAG NLRPDDHVLP 120
  121 SATKSCAILS RCDIGRSVHC LSMKTGYDAD VFVGSSLVDM YAKCGEIVYA RKMFDEMPQR 180
  181 NVVTWSGMMY GYAQMGENEE ALWLFKEALF ENLAVNDYSF SSVISVCANS TLLELGRQIH 240
  241 GLSIKSSFDS SSFVGSSLVS LYSKCGVPEG AYQVFNEVPV KNLGIWNAML KAYAQHSHTQ 300
  301 KVIELFKRMK LSGMKPNFIT FLNVLNACSH AGLVDEGRYY FDQMKESRIE PTDKHYASLV 360
  361 DMLGRAGRLQ EALEVITNMP IDPTESVWGA LLTSCTVHKN TELAAFAADK VFELGPVSSG 420
  421 MHISLSNAYA ADGRFEDAAK ARKLLRDRGE KKETGLSWVE ERNKVHTFAA GERRHEKSKE 480
  481 IYEKLAELGE EMEKAGYIAD TSYVLREVDG DEKNQTIRYH SERLAIAFGL ITFPADRPIR 540
  541 VMKNLRVCGD CHNAIKFMSV CTRRVIIVRD NNRFHRFEDG KCSCNDYW

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 16.522879
Match: 2gw1A
Description: No description for 2gw1A was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle