| Protein: | SDP6_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 629 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SDP6_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
417.0 | [0..1] | [628..1] |
|
Region A: Residues: [1-70] |
1 11 21 31 41 51
| | | | | |
1 MSLASIRRLA AGAAVIAAAS GGAVYLSPSV ASSDKGGGPI LDSLRRRLGD PTASVPSRSA 60
61 QESALIAATA
|
| Detection Method: |  |
| Confidence: | 5.045757 |
| Match: | 1rp0A |
| Description: | Crystal Structure of Thi1 protein from Arabidopsis thaliana |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [71-629] |
1 11 21 31 41 51
| | | | | |
1 SDPLDVLVIG GGATGSGVAL DAVTRGLRVG LVEREDFSSG TSSRSTKLIH GGVRYLEKAV 60
61 FNLDYGQLKL VFHALEERKQ LIENAPHLCH ALPCMTPCFD WFEVIYFWMG LKMYDLVAGP 120
121 RLLHLSRYYS AKESIELFPT LARKGKDKNL RGTVVYYDGQ MNDSRLNVGL ACTAALAGAA 180
181 VLNHAEVVSL ITDDATKRII GARIRNNLTG QEFNSYAKVV VNAAGPFCDS IRKMIDEDTK 240
241 PMICPSSGVH IVLPDYYSPE GMGLIVPKTK DGRVVFMLPW LGRTVAGTTD SNTSITSLPE 300
301 PHEDEIQFIL DAISDYLNIK VRRTDVLSAW SGIRPLAMDP TAKSTESISR DHVVFEENPG 360
361 LVTITGGKWT TYRSMAEDAV DAAIKSGQLK PTNECVTQKL QLLGSYGWEP SSFTTLAQQY 420
421 VRMKKTYGGK VVPGAMDTAA AKHLSHAYGS MADRVATIAQ EEGLGKRLAH GHPFLEAEVA 480
481 YCARHEYCES AVDFIARRCR IAFLDTDAAA RALQRVVEIL ASEHKWDKSR QKQELQKAKE 540
541 FLETFKSSKN AQFNDGKHN
|
| Detection Method: | |
| Confidence: | 32.0 |
| Match: | 1pj5A |
| Description: | Crystal structure of dimethylglycine oxidase of Arthrobacter globiformis in complex with acetate |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| oxidoreductase activity | 2.3417445147889 | bayes_pls_golite062009 |
| oxidoreductase activity, acting on the CH-NH group of donors, quinone or similar compound as acceptor | 2.25002926602325 | bayes_pls_golite062009 |
| electron-transferring-flavoprotein dehydrogenase activity | 1.55451764082771 | bayes_pls_golite062009 |
| oxidoreductase activity, acting on sulfur group of donors, NAD or NADP as acceptor | 1.45104542724719 | bayes_pls_golite062009 |
| oxidoreductase activity, acting on sulfur group of donors | 1.18990628739838 | bayes_pls_golite062009 |
| antioxidant activity | 1.12347155061135 | bayes_pls_golite062009 |
| oxidoreductase activity, acting on the CH-NH2 group of donors, oxygen as acceptor | 1.08975609376408 | bayes_pls_golite062009 |
| catalytic activity | 1.03127962968326 | bayes_pls_golite062009 |
| oxidoreductase activity, acting on NADH or NADPH | 0.985237795107607 | bayes_pls_golite062009 |
| oxidoreductase activity, acting on the CH-NH2 group of donors | 0.955909900559292 | bayes_pls_golite062009 |
| binding | 0.850689563354756 | bayes_pls_golite062009 |
| dihydrolipoyl dehydrogenase activity | 0.69501605197281 | bayes_pls_golite062009 |
| pyruvate dehydrogenase activity | 0.494423552127166 | bayes_pls_golite062009 |
| oxidoreductase activity, acting on the CH-NH group of donors | 0.442625746935807 | bayes_pls_golite062009 |
| protein binding | 0.370064403093958 | bayes_pls_golite062009 |
| NADPH-adrenodoxin reductase activity | 0.23045510393832 | bayes_pls_golite062009 |
| nucleic acid binding | 0.162130833238942 | bayes_pls_golite062009 |
| amine oxidase activity | 0.0576694782267841 | bayes_pls_golite062009 |
| DNA binding | 0.022476246602636 | bayes_pls_golite062009 |
