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View Structure Prediction Details

Protein: CESA9_ARATH
Organism: Arabidopsis thaliana
Length: 1088 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

No multiple sequence alignment data found for CESA9_ARATH.

Predicted Domain #1
Region A:
Residues: [1-99]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNTGGRLIAG SHNRNEFVLI NADDTARIRS AEELSGQTCK ICRDEIELTD NGEPFIACNE  60
   61 CAFPTCRPCY EYERREGNQA CPQCGTRYKR IKGSPRVEG

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 28.39794
Match: 1weoA
Description: Solution structure of RING-finger in the catalytic subunit (IRX3) of cellulose synthase
Matching Structure (courtesy of the PDB):

Predicted Domain #2
Region A:
Residues: [100-303]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DEEDDDIDDL EHEFYGMDPE HVTEAALYYM RLNTGRGTDE VSHLYSASPG SEVPLLTYCD  60
   61 EDSDMYSDRH ALIVPPSTGL GNRVHHVPFT DSFASIHTRP MVPQKDLTVY GYGSVAWKDR 120
  121 MEVWKKQQIE KLQVVKNERV NDGDGDGFIV DELDDPGLPM MDEGRQPLSR KLPIRSSRIN 180
  181 PYRMLIFCRL AILGLFFHYR ILHP

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [304-447]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 VNDAFGLWLT SVICEIWFAV SWILDQFPKW YPIERETYLD RLSLRYEKEG KPSELAPVDV  60
   61 FVSTVDPLKE PPLITANTVL SILAVDYPVE KVACYVSDDG AAMLTFEALS YTAEFARKWV 120
  121 PFCKKFSIEP RAPEWYFSQK MDYL

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [448-653]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 KHKVDPAFVM ERRAMKRDYE EFKVKINALV SVSQKVPEDG WTMQDGTPWP GNNVRDHPGM  60
   61 IQVFLGHSGV CDMDGNELPR LVYVSREKRP GFDHHKKAGA MNSLIRVSAV LSNAPYLLNV 120
  121 DCDHYINNSK AIREAMCFMM DPQSGKKICY VQFPQRFDGI DRHDRYSNRN VVFFDINMKG 180
  181 LDGIQGPIYV GTGCVFRRQA LYGFDA

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 4.69897
Match: 2z87A
Description: No description for 2z87A was found.

Predicted Domain #5
Region A:
Residues: [654-833]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PKKKQPPGRT CNCWPKWCCL CCGMRKKKTG KVKDNQRKKP KETSKQIHAL EHIEEGLQVT  60
   61 NAENNSETAQ LKLEKKFGQS PVLVASTLLL NGGVPSNVNP ASLLRESIQV ISCGYEEKTE 120
  121 WGKEIGWIYG SVTEDILTGF KMHCHGWRSV YCMPKRAAFK GSAPINLSDR LHQVLRWALG 180
  181 

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #6
Region A:
Residues: [834-973]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SVEIFLSRHC PIWYGYGGGL KWLERFSYIN SVVYPWTSLP LLVYCSLPAI CLLTGKFIVP  60
   61 EISNYAGILF LLMFMSIAVT GILEMQWGKI GIDDWWRNEQ FWVIGGVSSH LFALFQGLLK 120
  121 VLAGVSTNFT VTSKAADDGE 

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #7
Region A:
Residues: [974-1088]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 FSELYIFKWT SLLIPPTTLL IINIVGVIVG VSDAINNGYD SWGPLFGRLF FALWVIVHLY  60
   61 PFLKGLLGKQ DRVPTIILVW SILLASILTL LWVRVNPFVS KDGPVLEICG LDCLK

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle