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View Structure Prediction Details

Protein: CESA9_ARATH
Organism: Arabidopsis thaliana
Length: 1088 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

No multiple sequence alignment data found for CESA9_ARATH.

Predicted Domain #1
Region A:
Residues: [1-99]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNTGGRLIAG SHNRNEFVLI NADDTARIRS AEELSGQTCK ICRDEIELTD NGEPFIACNE  60
   61 CAFPTCRPCY EYERREGNQA CPQCGTRYKR IKGSPRVEG

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 28.39794
Match: 1weoA
Description: Solution structure of RING-finger in the catalytic subunit (IRX3) of cellulose synthase
Matching Structure (courtesy of the PDB):

Predicted Domain #2
Region A:
Residues: [100-303]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DEEDDDIDDL EHEFYGMDPE HVTEAALYYM RLNTGRGTDE VSHLYSASPG SEVPLLTYCD  60
   61 EDSDMYSDRH ALIVPPSTGL GNRVHHVPFT DSFASIHTRP MVPQKDLTVY GYGSVAWKDR 120
  121 MEVWKKQQIE KLQVVKNERV NDGDGDGFIV DELDDPGLPM MDEGRQPLSR KLPIRSSRIN 180
  181 PYRMLIFCRL AILGLFFHYR ILHP

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [304-447]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 VNDAFGLWLT SVICEIWFAV SWILDQFPKW YPIERETYLD RLSLRYEKEG KPSELAPVDV  60
   61 FVSTVDPLKE PPLITANTVL SILAVDYPVE KVACYVSDDG AAMLTFEALS YTAEFARKWV 120
  121 PFCKKFSIEP RAPEWYFSQK MDYL

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [448-653]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 KHKVDPAFVM ERRAMKRDYE EFKVKINALV SVSQKVPEDG WTMQDGTPWP GNNVRDHPGM  60
   61 IQVFLGHSGV CDMDGNELPR LVYVSREKRP GFDHHKKAGA MNSLIRVSAV LSNAPYLLNV 120
  121 DCDHYINNSK AIREAMCFMM DPQSGKKICY VQFPQRFDGI DRHDRYSNRN VVFFDINMKG 180
  181 LDGIQGPIYV GTGCVFRRQA LYGFDA

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 4.69897
Match: 2z87A
Description: No description for 2z87A was found.

Predicted Domain #5
Region A:
Residues: [654-833]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PKKKQPPGRT CNCWPKWCCL CCGMRKKKTG KVKDNQRKKP KETSKQIHAL EHIEEGLQVT  60
   61 NAENNSETAQ LKLEKKFGQS PVLVASTLLL NGGVPSNVNP ASLLRESIQV ISCGYEEKTE 120
  121 WGKEIGWIYG SVTEDILTGF KMHCHGWRSV YCMPKRAAFK GSAPINLSDR LHQVLRWALG 180
  181 

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #6
Region A:
Residues: [834-973]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SVEIFLSRHC PIWYGYGGGL KWLERFSYIN SVVYPWTSLP LLVYCSLPAI CLLTGKFIVP  60
   61 EISNYAGILF LLMFMSIAVT GILEMQWGKI GIDDWWRNEQ FWVIGGVSSH LFALFQGLLK 120
  121 VLAGVSTNFT VTSKAADDGE 

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #7
Region A:
Residues: [974-1088]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 FSELYIFKWT SLLIPPTTLL IINIVGVIVG VSDAINNGYD SWGPLFGRLF FALWVIVHLY  60
   61 PFLKGLLGKQ DRVPTIILVW SILLASILTL LWVRVNPFVS KDGPVLEICG LDCLK

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle