YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: BAC2_ARATH
Organism: Arabidopsis thaliana
Length: 296 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for BAC2_ARATH.

Description E-value Query
Range
Subject
Range
gi|215701397, gi... - gi|51090928|dbj|BAD35532.1| putative small calcium-binding mitochondrial carrier 2 [Oryza sativa Jap...
297.0 [0..8] [283..228]

Back

Predicted Domain #1
Region A:
Residues: [1-296]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDFWPEFMAT SWGREFVAGG FGGVAGIISG YPLDTLRIRQ QQSSKSGSAF SILRRMLAIE  60
   61 GPSSLYRGMA APLASVTFQN AMVFQIYAIF SRSFDSSVPL VEPPSYRGVA LGGVATGAVQ 120
  121 SLLLTPVELI KIRLQLQQTK SGPITLAKSI LRRQGLQGLY RGLTITVLRD APAHGLYFWT 180
  181 YEYVRERLHP GCRKTGQENL RTMLVAGGLA GVASWVACYP LDVVKTRLQQ GHGAYEGIAD 240
  241 CFRKSVKQEG YTVLWRGLGT AVARAFVVNG AIFAAYEVAL RCLFNQSPSP DIVTGD

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 76.221849
Match: 1okcA
Description: structure of mitochondrial ADP/ATP carrier in complex with carboxyatractyloside
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle