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View Structure Prediction Details

Protein: BLH3_ARATH
Organism: Arabidopsis thaliana
Length: 524 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for BLH3_ARATH.

Description E-value Query
Range
Subject
Range
gi|23197850, gi|... - gi|23197850|gb|AAN15452.1| Similar to homeodomain proteins [Arabidopsis thaliana], gi|17064938|gb|AA...
325.0 [0..1] [524..1]

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Predicted Domain #1
Region A:
Residues: [1-195]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAVYYPNSVG MQSLYQESIY LNEQQQQQQQ ASSSSAASFS EIVSGDVRNN EMVFIPPTSD  60
   61 VAVNGNVTVS SNDLSFHGGG LSLSLGNQIQ SAVSVSPFQY HYQNLSNQLS YNNLNPSTMS 120
  121 DENGKSLSVH QHHSDQILPS SVYNNNGNNG VGFYNNYRYE TSGFVSSVLR SRYLKPTQQL 180
  181 LDEVVSVRKD LKLGN

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [196-413]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 KKMKNDKGQD FHNGSSDNIT EDDKSQSQEL SPSERQELQS KKSKLLTMVD EVDKRYNQYH  60
   61 HQMEALASSF EMVTGLGAAK PYTSVALNRI SRHFRCLRDA IKEQIQVIRG KLGERETSDE 120
  121 QGERIPRLRY LDQRLRQQRA LHQQLGMVRP AWRPQRGLPE NSVSILRAWL FEHFLHPYPK 180
  181 ESEKIMLSKQ TGLSKNQVAN WFINARVRLW KPMIEEMY

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 9.0
Match: 2h8rA
Description: No description for 2h8rA was found.

Predicted Domain #3
Region A:
Residues: [414-524]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 KEEFGESAEL LSNSNQDTKK MQETSQLKHE DSSSSQQQNQ GNNNNNIPYT SDAEQNLVFA  60
   61 DPKPDRATTG DYDSLMNYHG FGIDDYNRYV GLGNQQDGRY SNPHQLHDFV V

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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Created and Maintained by: Michael Riffle