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View Structure Prediction Details

Protein: BLH3_ARATH
Organism: Arabidopsis thaliana
Length: 524 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for BLH3_ARATH.

Description E-value Query
Range
Subject
Range
gi|23197850, gi|... - gi|23197850|gb|AAN15452.1| Similar to homeodomain proteins [Arabidopsis thaliana], gi|17064938|gb|AA...
325.0 [0..1] [524..1]

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Predicted Domain #1
Region A:
Residues: [1-195]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAVYYPNSVG MQSLYQESIY LNEQQQQQQQ ASSSSAASFS EIVSGDVRNN EMVFIPPTSD  60
   61 VAVNGNVTVS SNDLSFHGGG LSLSLGNQIQ SAVSVSPFQY HYQNLSNQLS YNNLNPSTMS 120
  121 DENGKSLSVH QHHSDQILPS SVYNNNGNNG VGFYNNYRYE TSGFVSSVLR SRYLKPTQQL 180
  181 LDEVVSVRKD LKLGN

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [196-413]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 KKMKNDKGQD FHNGSSDNIT EDDKSQSQEL SPSERQELQS KKSKLLTMVD EVDKRYNQYH  60
   61 HQMEALASSF EMVTGLGAAK PYTSVALNRI SRHFRCLRDA IKEQIQVIRG KLGERETSDE 120
  121 QGERIPRLRY LDQRLRQQRA LHQQLGMVRP AWRPQRGLPE NSVSILRAWL FEHFLHPYPK 180
  181 ESEKIMLSKQ TGLSKNQVAN WFINARVRLW KPMIEEMY

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 9.0
Match: 2h8rA
Description: No description for 2h8rA was found.

Predicted Domain #3
Region A:
Residues: [414-524]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 KEEFGESAEL LSNSNQDTKK MQETSQLKHE DSSSSQQQNQ GNNNNNIPYT SDAEQNLVFA  60
   61 DPKPDRATTG DYDSLMNYHG FGIDDYNRYV GLGNQQDGRY SNPHQLHDFV V

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.


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Created and Maintained by: Michael Riffle