| Protein: | gi|9759607, gi|1... |
| Organism: | Arabidopsis thaliana |
| Length: | 546 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|9759607, gi|1....
| Description | E-value | Query Range |
Subject Range |
|
|
347.0 | [0..1] | [523..1] |
|
|
345.0 | [0..14] | [457..16] |
|
|
342.0 | [0..1] | [533..1] |
|
|
340.0 | [0..1] | [448..1] |
|
Region A: Residues: [1-155] |
1 11 21 31 41 51
| | | | | |
1 MATLSSSSSV ELPPQHTVFI LYNGSRMGFI YHLIMALEKK NINVFVGFNG CICEPVERLS 60
61 NRIESIIVLV IFTSRYTESK WCLMKLVDIN KCAEKDHLVA IPIFYKLDPS TVRGLSGQFG 120
121 DAFRDLREST GLMEKWKEAL KSISDRPGIR VDKSS
|
| Detection Method: |  |
| Confidence: | 3.22 |
| Match: | 1fyvA |
| Description: | Toll-like receptor 1, TLR1 |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [156-310] |
1 11 21 31 41 51
| | | | | |
1 PKAKRIEIVV KKVLSRIPSE GSHNASVDPL ENSDTRLTSS GEENRTFGIK ERLKEFKDKL 60
61 DLNKMRSQLG MVIGCLLVLF FVLKQSAYTS TRLIGEGGAI GAISAIDRIA DNVPKIREYV 120
121 PEEGTEKPRD TYTEFHTGKY GTKPERSSSD VKTNA
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [311-450] |
1 11 21 31 41 51
| | | | | |
1 DLLDRTFTDT RMDGKVKPPK FQVFINFRGD QLRNNFVGYL VDALRRSEIN VFIDNQEQRG 60
61 EDLNTLFKRI EDSGIAIVVF SSRYTESKWC LEELVKIKER VHQGLLKVLP IFYKVTPTNV 120
121 KRPKGEFGDH FRDKEYMYES
|
| Detection Method: | |
| Confidence: | 39.468521 |
| Match: | PF01582.11 |
| Description: | No description for PF01582.11 was found. |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.970 | N/A | N/A | c.16.1 | Lumazine synthase |
|
Region A: Residues: [451-546] |
1 11 21 31 41 51
| | | | | |
1 DEPMIKRWKE AIVFISHRFA LTLDEKSSSE MLDTSLHMYV HARVWNLKEL ISTFLTKCSS 60
61 ALEIDFVETI VKEVLKILQA ICKVESSQSS FCAEKA
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.900 | a.4.1 | Homeodomain-like |
