| Protein: | gi|9759607, gi|1... |
| Organism: | Arabidopsis thaliana |
| Length: | 546 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|9759607, gi|1....
| Description | E-value | Query Range |
Subject Range |
|
|
347.0 | [0..1] | [523..1] |
|
|
345.0 | [0..14] | [457..16] |
|
|
342.0 | [0..1] | [533..1] |
|
|
340.0 | [0..1] | [448..1] |
|
Region A: Residues: [1-155] |
1 11 21 31 41 51
| | | | | |
1 MATLSSSSSV ELPPQHTVFI LYNGSRMGFI YHLIMALEKK NINVFVGFNG CICEPVERLS 60
61 NRIESIIVLV IFTSRYTESK WCLMKLVDIN KCAEKDHLVA IPIFYKLDPS TVRGLSGQFG 120
121 DAFRDLREST GLMEKWKEAL KSISDRPGIR VDKSS
|
| Detection Method: |  |
| Confidence: | 3.22 |
| Match: | 1fyvA |
| Description: | Toll-like receptor 1, TLR1 |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [156-310] |
1 11 21 31 41 51
| | | | | |
1 PKAKRIEIVV KKVLSRIPSE GSHNASVDPL ENSDTRLTSS GEENRTFGIK ERLKEFKDKL 60
61 DLNKMRSQLG MVIGCLLVLF FVLKQSAYTS TRLIGEGGAI GAISAIDRIA DNVPKIREYV 120
121 PEEGTEKPRD TYTEFHTGKY GTKPERSSSD VKTNA
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [311-450] |
1 11 21 31 41 51
| | | | | |
1 DLLDRTFTDT RMDGKVKPPK FQVFINFRGD QLRNNFVGYL VDALRRSEIN VFIDNQEQRG 60
61 EDLNTLFKRI EDSGIAIVVF SSRYTESKWC LEELVKIKER VHQGLLKVLP IFYKVTPTNV 120
121 KRPKGEFGDH FRDKEYMYES
|
| Detection Method: | |
| Confidence: | 39.468521 |
| Match: | PF01582.11 |
| Description: | No description for PF01582.11 was found. |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.970 | N/A | N/A | c.16.1 | Lumazine synthase |
| View | Download | 0.970 | N/A | N/A | c.16.1 | Lumazine synthase |
| View | Download | 0.958 | N/A | N/A | c.16.1 | Lumazine synthase |
| View | Download | 0.953 | N/A | N/A | c.16.1 | Lumazine synthase |
| View | Download | 0.945 | N/A | N/A | c.16.1 | Lumazine synthase |
| View | Download | 0.945 | N/A | N/A | c.16.1 | Lumazine synthase |
| View | Download | 0.938 | N/A | N/A | c.16.1 | Lumazine synthase |
| View | Download | 0.938 | N/A | N/A | c.16.1 | Lumazine synthase |
| View | Download | 0.931 | N/A | N/A | c.48.1 | TK C-terminal domain-like |
| View | Download | 0.924 | N/A | N/A | c.23.6 | Cobalamin (vitamin B12)-binding domain |
|
Region A: Residues: [451-546] |
1 11 21 31 41 51
| | | | | |
1 DEPMIKRWKE AIVFISHRFA LTLDEKSSSE MLDTSLHMYV HARVWNLKEL ISTFLTKCSS 60
61 ALEIDFVETI VKEVLKILQA ICKVESSQSS FCAEKA
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.900 | a.4.1 | Homeodomain-like |
| View | Download | 0.895 | a.277.1 | Description not found. |
| View | Download | 0.888 | a.56.1 | CO dehydrogenase ISP C-domain like |
| View | Download | 0.888 | a.56.1 | CO dehydrogenase ISP C-domain like |
| View | Download | 0.880 | a.247.1 | Description not found. |
| View | Download | 0.877 | a.186.1 | Description not found. |
| View | Download | 0.871 | a.188.1 | Description not found. |
| View | Download | 0.867 | a.23.4 | Mitochondrial import receptor subunit Tom20 |
| View | Download | 0.850 | a.60.9 | lambda integrase-like, N-terminal domain |
| View | Download | 0.781 | a.112.1 | Description not found. |
| View | Download | 0.772 | a.165.1 | Myosin phosphatase inhibitor 17kDa protein, CPI-17 |
| View | Download | 0.689 | a.4.1 | Homeodomain-like |
| View | Download | 0.564 | a.7.8 | GAT domain |
| View | Download | 0.550 | a.165.1 | Myosin phosphatase inhibitor 17kDa protein, CPI-17 |
| View | Download | 0.543 | a.130.1 | Chorismate mutase II |
