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View Structure Prediction Details

Protein: GDL6_ARATH
Organism: Arabidopsis thaliana
Length: 389 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for GDL6_ARATH.

Description E-value Query
Range
Subject
Range
gi|42562378 - gi|42562378|ref|NP_174179.2| carboxylic ester hydrolase/ hydrolase, acting on ester bonds / lipase [...
402.0 [0..6] [389..1]

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Predicted Domain #1
Region A:
Residues: [1-132]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MATLFMKLVS FFLILSTFCL TTVNSEPQCH NFKSIISFGD SIADTGNLLA LSDPTNLPKV  60
   61 AFLPYGETFF HHPTGRFSNG RLIIDFIAEF LGFPLVPPFY GSQNANFEKG VNFAVGGATA 120
  121 LERSFLEERG IH

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [133-225]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 FPYTNVSLAV QLSSFKESLP NLCVSPSDCR DMIENSLILM GEIGGNDYNY AFFVGKNIEE  60
   61 IKELVPLVIE TISSAITELI GMGGKTFLVP GEF

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [226-389]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PLGCSVAYLS LYQTSNIEEY DPLTGCLKWL NKFSEYHDEQ LQAELNRLQK LYPHVNIIYA  60
   61 DYYNTLLRLA QEPAKFGFIS RPLPACCALG GPFNFTLGRK RGTQVPECCD DPSKYVSWDG 120
  121 VHMTEAAYRL MAEGILKGPY AIPPFDWSCL SSEIKNTQNS LMNN

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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