| Protein: | GDI1_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 445 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for GDI1_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
398.0 | [0..1] | [444..1] |
|
Region A: Residues: [1-445] |
1 11 21 31 41 51
| | | | | |
1 MDEEYEVIVL GTGLKECILS GLLSVDGLKV LHMDRNDYYG GESTSLNLNQ LWKKFRGEEK 60
61 APAHLGSSRD YNVDMMPKFM MANGKLVRVL IHTDVTKYLS FKAVDGSYVF VQGKVQKVPA 120
121 TPMEALKSPL MGIFEKRRAG KFFSYVQEYD EKDPKTHDGM DLRRVTTKDL IAKFGLKEDT 180
181 IDFIGHAVAL HCNDNHLHQP AYDTVMRMKL YAESLARFQG GSPYIYPLYG LGELPQAFAR 240
241 LSAVYGGTYM LNKPECKVEF DEEGKVSGVT SEGETAKCKK VVCDPSYLTN KVRKIGRVAR 300
301 AIAIMSHPIP NTNDSQSVQV ILPQKQLGRK SDMYVFCCSY SHNVAPKGKF IAFVSTDAET 360
361 DNPQTELQPG IDLLGPVDEL FFDIYDRYEP VNEPTLDNCF ISTSYDATTH FDTTVVDVLN 420
421 MYKLITGKEL DLSVDLNAAS AAEEE
|
| Detection Method: |  |
| Confidence: | 109.0 |
| Match: | 1lv0A |
| Description: | Crystal structure of the Rab effector guanine nucleotide dissociation inhibitor (GDI) in complex with a geranylgeranyl (GG) peptide |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| small GTPase regulator activity | 1.82777033221452 | bayes_pls_golite062009 |
| GTPase regulator activity | 1.69589677829425 | bayes_pls_golite062009 |
| nucleoside-triphosphatase regulator activity | 1.67690582043816 | bayes_pls_golite062009 |
| binding | 1.28745887296004 | bayes_pls_golite062009 |
| enzyme regulator activity | 1.00883251592654 | bayes_pls_golite062009 |
| amine oxidase activity | 0.93095855430028 | bayes_pls_golite062009 |
| GDP-dissociation inhibitor activity | 0.387378304822822 | bayes_pls_golite062009 |
| protein binding | 0.347133050347128 | bayes_pls_golite062009 |
| transporter activity | 0.0442116448779152 | bayes_pls_golite062009 |
| antioxidant activity | 0.0209903577090486 | bayes_pls_golite062009 |
| transcription regulator activity | 0.00424758775661527 | bayes_pls_golite062009 |
