| Protein: | MYB28_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 366 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for MYB28_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
258.0 | [0..1] | [366..1] |
|
Region A: Residues: [1-141] |
1 11 21 31 41 51
| | | | | |
1 MSRKPCCVGE GLKKGAWTTE EDKKLISYIH DHGEGGWRDI PQKAGLKRCG KSCRLRWTNY 60
61 LKPEIKRGEF SSEEEQIIIM LHASRGNKWS VIARHLPRRT DNEIKNYWNT HLKKRLMEQG 120
121 IDPVTHKPLA SSSNPTVDEN L
|
| Detection Method: |  |
| Confidence: | 44.69897 |
| Match: | 1h88C |
| Description: | c-Myb, DNA-binding domain |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.334577365229545 | bayes_pls_golite062009 |
| transcription regulator activity | 0.0696342306231097 | bayes_pls_golite062009 |
|
Region A: Residues: [142-366] |
1 11 21 31 41 51
| | | | | |
1 NSPNASSSDK QYSRSSSMPF LSRPPPSSCN MVSKVSELSS NDGTPIQGSS LSCKKRFKKS 60
61 SSTSRLLNKV AAKATSIKDI LSASMEGSLS ATTISHASFF NGFTEQIRNE EDSSNTSLTN 120
121 TLAEFDPFSP SSLYPEHEIN ATSDLNMDQD YDFSQFFEKF GGDNHNEENS MNDLLMSDVS 180
181 QEVSSTSVDD QDNMVGNFEG WSNYLLDHTN FMYDTDSDSL EKHFI
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
