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View Structure Prediction Details

Protein: gi|11358494, gi|...
Organism: Arabidopsis thaliana
Length: 390 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|11358494, gi|....

Description E-value Query
Range
Subject
Range
gi|21553600 - gi|21553600|gb|AAM62693.1| lysophospholipase-like protein [Arabidopsis thaliana]
220.0 [0..8] [390..1]

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Predicted Domain #1
Region A:
Residues: [1-390]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASTSAEMDQ LTSGASNRII FILRTLRKCL VFVLSLVLSL LLILRLRPRR RVSPLSSPED  60
   61 EAVPAPSRRW RRKMAWKLEE EDTARRRSLA EGVEMAGDGE ISCSLFYGRR GNALFSRSWL 120
  121 PISGELRGIL IIIHGLNEHS GRYSQFAKQL NASNLGVYAM DWIGHGGSDG LHGYVPSLDY 180
  181 VVSDTEAFLE KIRSENPGVP CFLFGHSTGG AVVLKAASSP SIEDMLAGIV LTSPALRVKP 240
  241 AHPIVGAIAP IFSLLAPRFQ FKGANKRGIP VSRDPEALLA KYSDPLVYTG PIRVRTGYEI 300
  301 LRITAYLTRN FKSVTVPFFV LHGTEDKVTD PLASQDLYNQ APSVFKDIKL YDGFLHDLLF 360
  361 EPEREEVGRD IIDWMMNRLD DVNGSAASLW 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 18.69897
Match: 1ve6A
Description: Crystal structure of an acylpeptide hydrolase/esterase from Aeropyrum pernix K1
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 1.39629727416851 bayes_pls_golite062009
hydrolase activity 1.02824339321154 bayes_pls_golite062009
lipase activity 0.849473630399459 bayes_pls_golite062009
carboxylesterase activity 0.424330502936163 bayes_pls_golite062009
hydrolase activity, acting on ester bonds 0.282381128231187 bayes_pls_golite062009
palmitoyl-(protein) hydrolase activity 0.054530214464529 bayes_pls_golite062009
palmitoyl-CoA hydrolase activity 0.00303228391703936 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle