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View Structure Prediction Details

Protein: KRP7_ARATH
Organism: Arabidopsis thaliana
Length: 195 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for KRP7_ARATH.

Description E-value Query
Range
Subject
Range
gi|14422297 - gi|14422297|emb|CAC41621.1| cyclin-dependent kinase inhibitor 7 [Arabidopsis thaliana]
178.0 [0..1] [195..1]
gi|42362358 - gi|42362358|gb|AAS13374.1| cyclin-dependent kinase inhibitor 1;1 [Glycine max]
155.0 [0..10] [195..21]
gi|23899378 - gi|23899378|emb|CAD29648.1| p27KIP1-related-protein 1 [Solanum lycopersicum]
152.0 [0..12] [194..34]
gi|12081915 - gi|12081915|dbj|BAB20860.1| cyclin dependent kinase inhibitor [Pisum sativum]
142.0 [0..22] [195..18]

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Predicted Domain #1
Region A:
Residues: [1-126]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSETKPKRDS EYEGSNIKRM RLDDDDDVLR SPTRTLSSSS SSSLAYSVSD SGGFCSVALS  60
   61 EEEDDHLSSS ISSGCSSSET NEIATRLPFS DLEAHEISET EISTLLTNNF RKQGISSSEN 120
  121 LGETAE

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [127-195]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDSATTEMRD QRKTEKKKKM EKSPTQAELD DFFSAAERYE QKRFTEKYNY DIVNDTPLEG  60
   61 RYQWVSLKP

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 2.18
Match: 1jsuC
Description: P27(KIP1) fragment 22-106
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle