| Protein: | HFA4C_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 345 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for HFA4C_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
277.0 | [0..1] | [342..1] |
|
Region A: Residues: [1-91] |
1 11 21 31 41 51
| | | | | |
1 MDENNGGSSS LPPFLTKTYE MVDDSSSDSV VAWSENNKSF IVKNPAEFSR DLLPRFFKHK 60
61 NFSSFIRQLN TYGFRKVDPE KWEFLNDDFV R
|
| Detection Method: |  |
| Confidence: | 33.0 |
| Match: | 1hksA |
| Description: | SOLUTION STRUCTURE OF THE DNA-BINDING DOMAIN OF DROSOPHILA HEAT SHOCK TRANSCRIPTION FACTOR |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.835523092977445 | bayes_pls_golite062009 |
| transcription regulator activity | 0.4843036104266 | bayes_pls_golite062009 |
| nucleic acid binding | 0.37117756729668 | bayes_pls_golite062009 |
| DNA binding | 0.3118855114645 | bayes_pls_golite062009 |
|
Region A: Residues: [92-345] |
1 11 21 31 41 51
| | | | | |
1 GRPYLMKNIH RRKPVHSHSL VNLQAQNPLT ESERRSMEDQ IERLKNEKEG LLAELQNQEQ 60
61 ERKEFELQVT TLKDRLQHME QHQKSIVAYV SQVLGKPGLS LNLENHERRK RRFQENSLPP 120
121 SSSHIEQVEK LESSLTFWEN LVSESCEKSG LQSSSMDHDA AESSLSIGDT RPKSSKIDMN 180
181 SEPPVTVTAP APKTGVNDDF WEQCLTENPG STEQQEVQSE RRDVGNDNNG NKIGNQRTYW 240
241 WNSGNVNNIT EKAS
|
| Detection Method: | |
| Confidence: | 1.46 |
| Match: | 1jchA |
| Description: | Ribonuclease domain of colicin E3; Colicin E3 translocation domain; Colicin E3 receptor domain |
Matching Structure (courtesy of the PDB): |
|
