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View Structure Prediction Details

Protein: gi|110737014, gi...
Organism: Arabidopsis thaliana
Length: 261 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|110737014, gi....

Description E-value Query
Range
Subject
Range
gi|31432894, gi|... - gi|37535762|ref|NP_922183.1| putative ribosomal protein [Oryza sativa (japonica cultivar-group)], gi...
190.0 [0..54] [247..41]

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Predicted Domain #1
Region A:
Residues: [1-153]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSIARFATRS LNNVTFLRPF RPIVSRSLAT NANEDPNQNR SSFDSSDNLD SLFGDYTGND  60
   61 EKSNDFFQHL SKAEKDKRDF NGYNRSGGSR YSGGGSMSKD ETFDPSSDGV DGKLKEAALA 120
  121 YNMDEGDGFK EYSFRPDFNN SWGMNNFPRM QKQ

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [154-261]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQNPRQNNSK SEVTTEEVLK NADFRNVRFL ANFITEAGII IKRKQTGISA KAQRKIAREI  60
   61 KTARAFGLMP FTTMGTKAFQ FGKTMENRDQ DFEYEVLDDD DEFDEGNA

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 20.0
Match: 2uu9R
Description: No description for 2uu9R was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle