| Protein: | gi|9757914, gi|1... |
| Organism: | Arabidopsis thaliana |
| Length: | 656 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|9757914, gi|1....
| Description | E-value | Query Range |
Subject Range |
|
|
499.0 | [0..3] | [648..7] |
|
Region A: Residues: [1-75] |
1 11 21 31 41 51
| | | | | |
1 MDTSAVQLPF RDYSLQPAPR YINARCHICS VTGAIYNGYF CNDPIVWMHK ECVELPSEIN 60
61 HLFHPQHPLL LTYEE
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.309 | a.7.10 | Description not found. |
| View | Download | 0.257 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.257 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.250 | a.7.10 | Description not found. |
| View | Download | 0.244 | a.28.1 | ACP-like |
| View | Download | 0.239 | a.46.2 | Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain |
| View | Download | 0.239 | a.46.2 | Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain |
|
Region A: Residues: [76-176] |
1 11 21 31 41 51
| | | | | |
1 GWWSCFCALC GETKPAKYFY SCSTCKIKVD LTCGMNPPPP AIEHPICHDH PLVFLKKRQE 60
61 KTPCEVCKNR ILGSSYSCLG CELYFHVGCI HLSKEVNHPC H
|
| Detection Method: | |
| Confidence: | 2.19 |
| Match: | 1v5nA |
| Description: | Solution Structure of DC1 Domain of PDI-like Hypothetical Protein from Arabidopsis thaliana |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [177-245] |
1 11 21 31 41 51
| | | | | |
1 SDHPLMLVES ESLTDNDKKT CFLCGQQPHG ILYHCSICNF TLCIGCIKSP PPLVVENVKT 60
61 HKHPLTFFP
|
| Detection Method: | |
| Confidence: | 5.39794 |
| Match: | 1xa6A |
| Description: | Crystal Structure of the Human Beta2-Chimaerin |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [246-346] |
1 11 21 31 41 51
| | | | | |
1 RGVYCTCNVC GVKGLILSYM CLQCGFAVHC SCVDLPQVIN INRHDHRISF TQHLGPGYLN 60
61 CGVCRRSVCQ FNGAYSCLVC PNYAVHSRCA TRYDIWDGVE L
|
| Detection Method: | |
| Confidence: | 2.91 |
| Match: | 1v5nA |
| Description: | Solution Structure of DC1 Domain of PDI-like Hypothetical Protein from Arabidopsis thaliana |
| Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [347-424] |
1 11 21 31 41 51
| | | | | |
1 EGKAENIEDI APFKVVGDDL IRHFSHSKHS LRLHKNNIIY DDSTRCEACG HPVEFGRIYN 60
61 CEECCFILHE KCANLPMK
|
| Detection Method: | |
| Confidence: | 3.09691 |
| Match: | 2ysmA |
| Description: | No description for 2ysmA was found. |
|
Region A: Residues: [425-588] |
1 11 21 31 41 51
| | | | | |
1 KRLVFSTLPF LLLGPGNDVC KVLDCKLCGM FFTGFEYKSQ ERRQSDIDVH CGSLTEPFVH 60
61 DGHLHPLYFD QKQKELPCNA CQKTIRDYML CCADCDFNLC LWCASLPKKI RHSNDEHILT 120
121 LCCGEEANGK YWCDICEAEL DPSKWFYTCF GCGGTLHVEC VLGD
|
| Detection Method: | |
| Confidence: | 4.045757 |
| Match: | 1v5nA |
| Description: | Solution Structure of DC1 Domain of PDI-like Hypothetical Protein from Arabidopsis thaliana |
| Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [589-656] |
1 11 21 31 41 51
| | | | | |
1 FSRLMPGCTI DYRVYTVEVV FNNHNTRPMC SRCHSRCKVS VILKFREGNI VYFFCSRSCF 60
61 LMHFSYYL
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.791 | d.95.2 | Homing endonucleases |
| View | Download | 0.791 | d.95.2 | Homing endonucleases |
| View | Download | 0.685 | d.95.2 | Homing endonucleases |
| View | Download | 0.685 | d.95.2 | Homing endonucleases |
| View | Download | 0.636 | g.3.7 | Scorpion toxin-like |
| View | Download | 0.632 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.623 | d.58.18 | Regulatory domain in the aminoacid metabolism |
| View | Download | 0.583 | d.58.23 | Probable ACP-binding domain of malonyl-CoA ACP transacylase |
| View | Download | 0.570 | d.68.7 | R3H domain |
| View | Download | 0.562 | b.40.4 | Nucleic acid-binding proteins |
| View | Download | 0.562 | b.40.4 | Nucleic acid-binding proteins |
| View | Download | 0.529 | b.40.4 | Nucleic acid-binding proteins |
| View | Download | 0.426 | d.74.1 | Pterin-4a-carbinolamine dehydratase (PCD)/dimerization cofactor of HNF1 (DCoH) |
| View | Download | 0.395 | d.51.1 | Eukaryotic type KH-domain (KH-domain type I) |
