| Protein: | GPDL7_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 750 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for GPDL7_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
517.0 | [0..1] | [741..1] |
|
|
486.0 | [0..2] | [741..1] |
|
|
486.0 | [0..2] | [741..1] |
|
|
477.0 | [0..8] | [747..7] |
|
Region A: Residues: [1-332] |
1 11 21 31 41 51
| | | | | |
1 MLRFIIFFSL FIHLCVAAPQ TPAAAAAVPA KKWLTLNGQE PAVVARGGFS GLFPESSASA 60
61 NDLAIGTSSP GLTMLCNLQM TKDGVGLCLS DIILDNATTI SSVFPKAQKT YKVNGQDLKG 120
121 WFVLDYDADT IFNNVTLVQN IFSRPSIFDG QMSVSAVEDV LGTKPPKFWL SVQYDAFYME 180
181 HKLSPAEYLR SLQFRGINVI SSPEIGFLKS IGMDAGRAKT KLIFEFKDPE AVEPTTNKKY 240
241 SEIQQNLAAI KAFASGVLVP KDYIWPIDSA KYLKPATTFV ADAHKAGLEV YASGFANDLR 300
301 TSFNYSYDPS AEYLQFVDNG QFSVDGVITD FP
|
| Detection Method: |  |
| Confidence: | 6.96 |
| Match: | 1ydyA |
| Description: | Crystal structure of periplasmic glycerophosphodiester phosphodiesterase from Escherichia coli |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [333-662] |
1 11 21 31 41 51
| | | | | |
1 PTASQSITCF SHQNGNLPKA GHALVITHNG ASGDYPGCTD LAYQKAVDDG ADVIDCSVQM 60
61 SKDGIAFCHD AADLTASTTA MTIFMSRATS VPEIQPTNGI FSFDLTWAEI QSVKPQIENP 120
121 FTATGFQRNP ANKNAGKFIT LADFLDFSKA KAVTGVMINI ENAAYLASKK GLGVVDAVKS 180
181 ALAKSTLDKQ STQKVLIQSD DSSVLASFEA VPPYTRVLSI DKEIGGAPKP SVDEIKKYAE 240
241 AVNLLRTSLV TVSQSFTTGK TNVVEEMHKG NISVYVSVLR NEYISVAFDY FSDPTIELAT 300
301 FISGSGVDGV ITEFPATATR YLKSPCSDLN
|
| Detection Method: | |
| Confidence: | 64.0 |
| Match: | 1ydyA |
| Description: | Crystal structure of periplasmic glycerophosphodiester phosphodiesterase from Escherichia coli |
| Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [663-750] |
1 11 21 31 41 51
| | | | | |
1 KEQPYAILPA EAGGLVVVAD KEAQPPASAP NPPLEAKDVI DPPLPPVANL AASNATGGAQ 60
61 SHPPPASGTV ANAANLGLSL LAMLALGV
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
