| Protein: | gi|15240885, gi|... |
| Organism: | Arabidopsis thaliana |
| Length: | 1059 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|15240885, gi|....
| Description | E-value | Query Range |
Subject Range |
|
|
616.0 | [0..31] | [1059..7] |
|
Region A: Residues: [1-213] |
1 11 21 31 41 51
| | | | | |
1 MDSSFLSSFC ATAIIFFTLF GTIYFMFYRK VKSHQENKTI ASSLALPTIP SSLSRKYDVF 60
61 PSFHGADVRK TFLSHMLKEF KRKGIVPFID NDIDRSKSIG PELDEAIRGS KIAIVMLSKN 120
121 YASSSWCLNE LVEITKCRKD LNQTVMTIFY GVDPTDVKKQ TGEFGKVFER TCESKTEEQV 180
181 KTWREVLDGA ATIAGEHWHI WDNEASMIEK ISI
|
| Detection Method: |  |
| Confidence: | 4.34 |
| Match: | 2j67A |
| Description: | No description for 2j67A was found. |
|
Region A: Residues: [214-503] |
1 11 21 31 41 51
| | | | | |
1 DVSNILNRSS PSRDFDDLIG MEAHMEKMKS LLSLHSNEVK MIGIWGPSGI GKTTIARVLY 60
61 NRFSGDFGLS VFMDNIKELM HTRPVGSDDY SAKLHLQNQL MSEITNHKET KITHLGVVPD 120
121 RLKDNKVLIV LDSIDQSIQL DAIAKETQWF GPGSRIIITT QDQKLLEAHD INNIYKVEFP 180
181 SKYEAFQIFC TYAFGQNFPK DGFEKLAWEV TDLLGELPLG LRVMGSHFRR MSKDDWVIAL 240
241 PRLKTRLDAN IQSILKFSYD ALSPEDKDLF LHIACLFNNE EIVKVEDYLA
|
| Detection Method: | |
| Confidence: | 8.69897 |
| Match: | 1z6tA |
| Description: | Structure of the apoptotic protease-activating factor 1 bound to ADP |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [504-1059] |
1 11 21 31 41 51
| | | | | |
1 LDFLDARHGL HLLAEKSLID LEGVNYKVLK MHNLLEQLGK EIVRYHPAHH SIREPEKRQF 60
61 LVDTKDICEV LADGTGSKSI KGICFDLDNL SGRLNISERA FEGMTNLKFL RVLRDRSEKL 120
121 YLPQGLNYLP KKLRLIEWDY FPMKSLPSNF CTTYLVNLHM RKSKLEKLWE GKQPLGNLKW 180
181 MNLSNSRNLK ELPDLSTATK LQDLNLTRCS SLVEIPFSIG NTTNLEKLNL VMCTSLVELP 240
241 SSIGSLHKLR ELRLRGCSKL EVLPTNISLE SLDNLDITDC SLLKSFPDIS TNIKHLSLAR 300
301 TAINEVPSRI KSWSRLRYFV VSYNENLKES PHALDTITML SSNDTKMQEL PRWVKKISRL 360
361 ETLMLEGCKN LVTLPELPDS LSNIGVINCE SLERLDCSFY KHPNMFIGFV NCLKLNKEAR 420
421 ELIQTSSSTC SILPGRRVPS NFTYRKTGGS VLVNLNQSPL STTLVFKACV LLVNKDDKKK 480
481 EANGTSFQVY YRIMDKRKLG VIVPWRSAHG FVVPPILAEH LLTFELEADV KTNEFFFEFE 540
541 VNRYEVVIKE CGVLQL
|
| Detection Method: | |
| Confidence: | 21.221849 |
| Match: | 2a0zA |
| Description: | The molecular structure of toll-like receptor 3 ligand binding domain |
Matching Structure (courtesy of the PDB): |
|
