| Protein: | gi|3033388, gi|1... |
| Organism: | Arabidopsis thaliana |
| Length: | 785 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|3033388, gi|1....
| Description | E-value | Query Range |
Subject Range |
|
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234.0 | [0..44] | [740..1925] |
|
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194.0 | [0..145] | [785..12] |
|
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185.0 | [0..60] | [742..952] |
|
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184.0 | [0..60] | [742..953] |
|
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184.0 | [0..52] | [742..934] |
|
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184.0 | [0..52] | [742..934] |
|
Region A: Residues: [1-192] |
1 11 21 31 41 51
| | | | | |
1 MHKQDNNDDE SDANRCFCSG KTVGFDLAFP VTERSHRHVT DMLNIGANLY FSERSTITNK 60
61 RLKNIIDIAF SINSLGKQYS TQTITIVHMQ YRSFLRRKPR RLLIATMFCG TSMFWSNELN 120
121 RKLNKDMVAV VSRCPTCATM QDHQIEDRNQ RHNDDVVFKK NLKAQVKTAP PAISDESSEN 180
181 RVDSLIGNKR KK
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [193-552] |
1 11 21 31 41 51
| | | | | |
1 NNKSRPGSPE KPRTRKGNNF SDNLGGASSL VQIWEARLNR SNGGNSAIHS QSIEISSEAS 60
61 VQEIHLLAPS IDGESESENE SKSPDQTVEI ESGTLNSVSD IIRRLSNEQK LTASNNGGAV 120
121 DMPIVKTPTL EKSSFQVVTC SPRIRGRQAY SDLLVHLERE RHRELESLLG RNAVSRFPQR 180
181 GRLQSMLRLR SLKRGLAIQD RHRGTTKSDL NRFQPSSTIL HLREKLREKA ANAAAEAGLK 240
241 KGQQSTVETE SMQSKETSGI LHSPSTERLS PQKRNIEEAI LRKNETETKM SYLQLKKAIV 300
301 AEVLERESDN TSPLTSVTPQ EPRILRNEEA GKLESGTEGT QETPFLETQE MSFQSGWEEQ 360
361
|
| Detection Method: | |
| Confidence: | 17.154902 |
| Match: | 1i84S |
| Description: | Heavy meromyosin subfragment |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [553-682] |
1 11 21 31 41 51
| | | | | |
1 EEYEDEQSYY GDMSYDWFTE ISRPRTYWED LRKSRYLEVM NTKSDKDDIC RLLERRTVSG 60
61 FLQSGLREKI DKLIMSRVQI HPAHRIEEAT KEEEKYDIGE EKDEDRDDLS QSSSQIFAPS 120
121 PAGSWSSLDT
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.553 | d.55.1 | Ribosomal protein L22 |
| View | Download | 0.553 | d.55.1 | Ribosomal protein L22 |
| View | Download | 0.422 | d.188.1 | Prokaryotic ribosomal protein L17 |
| View | Download | 0.422 | d.188.1 | Prokaryotic ribosomal protein L17 |
| View | Download | 0.400 | d.55.1 | Ribosomal protein L22 |
| View | Download | 0.400 | d.55.1 | Ribosomal protein L22 |
| View | Download | 0.289 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.245 | d.55.1 | Ribosomal protein L22 |
| View | Download | 0.245 | d.55.1 | Ribosomal protein L22 |
|
Region A: Residues: [683-785] |
1 11 21 31 41 51
| | | | | |
1 GVTSTPTHNL HSTLQLEMSE LRDSVKTCLD VNASLQKSVH LENPFKRKCC VCNETQVETL 60
61 LYRCGHMCTC LRCANELQYN GGKCPICHAK ILDVVRVFVD SRT
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| Detection Method: | |
| Confidence: | 8.522879 |
| Match: | 1fbvA |
| Description: | Cbl; N-terminal domain of cbl (N-cbl); CBL |
Matching Structure (courtesy of the PDB): |
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