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Protein Overview: gi|3033388, gi|1...

General Information:
Name(s) found: gi|7485803 [NCBI NR]
gi|3033388 [NCBI NR]
gi|15226860 [NCBI NR]
Description(s) found:
Found 7 descriptions.
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  • pir||T00474 hypothetical protein At2g34920 [imported] - Arabidopsis thaliana [NCBI NR]
  • gi|3033388|gb|AAC12832.1| hypothetical protein [Arabidopsis thaliana] [NCBI NR]
  • ref|NP_181038.1| ubiquitin-protein ligase-related [Arabidopsis thaliana] [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 785 amino acids

    Gene Ontology:
    Cellular Component: cellular_component [ND]
    Biological Process: pollen development [IMP]
    embryo sac development [IMP]
    Molecular Function: zinc ion binding [IEA]
    protein binding [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MHKQDNNDDE SDANRCFCSG KTVGFDLAFP VTERSHRHVT DMLNIGANLY FSERSTITNK  60
   61 RLKNIIDIAF SINSLGKQYS TQTITIVHMQ YRSFLRRKPR RLLIATMFCG TSMFWSNELN 120
  121 RKLNKDMVAV VSRCPTCATM QDHQIEDRNQ RHNDDVVFKK NLKAQVKTAP PAISDESSEN 180
  181 RVDSLIGNKR KKNNKSRPGS PEKPRTRKGN NFSDNLGGAS SLVQIWEARL NRSNGGNSAI 240
  241 HSQSIEISSE ASVQEIHLLA PSIDGESESE NESKSPDQTV EIESGTLNSV SDIIRRLSNE 300
  301 QKLTASNNGG AVDMPIVKTP TLEKSSFQVV TCSPRIRGRQ AYSDLLVHLE RERHRELESL 360
  361 LGRNAVSRFP QRGRLQSMLR LRSLKRGLAI QDRHRGTTKS DLNRFQPSST ILHLREKLRE 420
  421 KAANAAAEAG LKKGQQSTVE TESMQSKETS GILHSPSTER LSPQKRNIEE AILRKNETET 480
  481 KMSYLQLKKA IVAEVLERES DNTSPLTSVT PQEPRILRNE EAGKLESGTE GTQETPFLET 540
  541 QEMSFQSGWE EQEEYEDEQS YYGDMSYDWF TEISRPRTYW EDLRKSRYLE VMNTKSDKDD 600
  601 ICRLLERRTV SGFLQSGLRE KIDKLIMSRV QIHPAHRIEE ATKEEEKYDI GEEKDEDRDD 660
  661 LSQSSSQIFA PSPAGSWSSL DTGVTSTPTH NLHSTLQLEM SELRDSVKTC LDVNASLQKS 720
  721 VHLENPFKRK CCVCNETQVE TLLYRCGHMC TCLRCANELQ YNGGKCPICH AKILDVVRVF 780
  781 VDSRT

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..192] deduced N/A No confident structure predictions are available.
    2 View Details [193..552] PSI-BLAST 17.154902 Heavy meromyosin subfragment
    3 View Details [553..682] deduced N/A No confident structure predictions are available.
    4 View Details [683..785] PSI-BLAST 8.522879 Cbl; N-terminal domain of cbl (N-cbl); CBL


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.56

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle