| Protein: | gi|42568351, gi|... |
| Organism: | Arabidopsis thaliana |
| Length: | 653 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|42568351, gi|....
| Description | E-value | Query Range |
Subject Range |
|
|
465.0 | [0..11] | [643..7] |
|
Region A: Residues: [1-279] |
1 11 21 31 41 51
| | | | | |
1 MLRASLLCSS TSITFTPIQL FNPNSSHRFP RFELSRPVSA LSRTKCHLSL LRARGKSSFL 60
61 TRSTATDEAV ETSSNSGLDL VEVGFLSGVH GLQGEICIKP NTDFPDLRFS KPGRRWLKQQ 120
121 LLGQDKIDEV ELVEGRPHPA QKSWILKFRG LDDVDQVRQL VGATLLAEDD DRPELDEGEF 180
181 YSRDLVGMRV LLKETGQLVG TVANIFDNGG NDLLHVLLDS SMEVCNGNAK TNQLVWIPFV 240
241 DAIVPDVDLE RKEMYITPPK GLLEVNMRAD DRSKKERRQ
|
| Detection Method: |  |
| Confidence: | 51.0 |
| Match: | 2f1lA |
| Description: | Crystal structure of 16S rRNA processing protein from Pseudomonas aeruginosa at 2.46 A resolution |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| structural constituent of ribosome | 1.29091534523853 | bayes_pls_golite062009 |
| structural molecule activity | 1.00956887854211 | bayes_pls_golite062009 |
| nucleic acid binding | 0.69717198388911 | bayes_pls_golite062009 |
| translation factor activity, nucleic acid binding | 0.26589532866146 | bayes_pls_golite062009 |
| translation regulator activity | 0.26526765298916 | bayes_pls_golite062009 |
| catalytic activity | 0.197445126304941 | bayes_pls_golite062009 |
| translation initiation factor activity | 0.188806956279739 | bayes_pls_golite062009 |
| binding | 0.0862020085166608 | bayes_pls_golite062009 |
|
Region A: Residues: [280-653] |
1 11 21 31 41 51
| | | | | |
1 LEWKERKKQQ KRLIAAKKKL CEMEQKHVFD GLRFGEKSQR NLLADHILNV NSTLLQKALQ 60
61 SIDTSSKRWN VTEEINALRA RVSECNLSVS RECLSFDASK ENMGDNFSFL QQGQNLFSEG 120
121 KVSICLVLND HENEEPEGEN GVVSYLHALL DEEQRFIKEE DRACVPLVIV SPEHTIEALQ 180
181 KLFQDNDHFG FESEKIWILK EETLPVVCSS PEEPKKHKIL MKSPWEILES PVGSGGVLSI 240
241 LASHGTTDSL STLGINYLQV HSIETKPQPS QHYINPMLVG FVSARGAEIG IQVTEESELK 300
301 NLEMTFSMKF LKRLKGKIEF EAVMKMNSHV QNVEKEWVES VPSEPNSFEF RSDIYRVLSE 360
361 CSSSAKICLM NITV
|
| Detection Method: | |
| Confidence: | 106.0 |
| Match: | 1vm8A |
| Description: | Crystal structure of UDP-N-acetylglucosamine pyrophosphorylase (Agx2) from Mus musculus at 2.50 A resolution |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| catalytic activity | 2.25720704697246 | bayes_pls_golite062009 |
| transferase activity | 1.67251862595728 | bayes_pls_golite062009 |
| nucleotidyltransferase activity | 0.80808530959278 | bayes_pls_golite062009 |
| transferase activity, transferring phosphorus-containing groups | 0.280335197569099 | bayes_pls_golite062009 |
