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View Structure Prediction Details

Protein: ILVH1_ARATH
Organism: Arabidopsis thaliana
Length: 477 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ILVH1_ARATH.

Description E-value Query
Range
Subject
Range
ILVH2_ARATH - Acetolactate synthase small subunit 2, chloroplastic OS=Arabidopsis thaliana GN=At2g31810 PE=1 SV=1
437.0 [0..5] [477..16]

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Predicted Domain #1
Region A:
Residues: [1-230]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAATTTATSL FSSRLHFQNQ NQGYGFPAKT PNSLQVNQII DGRKMRNATV LSAASTDKAI  60
   61 TTAQSVAPTA CDRVRRHTIS VFVGDESGII NRIAGVFARR GYNIESLAVG LNEDKALFTI 120
  121 VVLGTDKVLQ QVVEQLNKLV NVIKVEDLSK EPHVERELML IKLNADPSTR SEIMWLVDIF 180
  181 RAKIVDTSEQ SLTIEVTGDP GKMVALTTNL EKFGIKEIAR TGKIALRREK 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 7.221849
Match: 2f06A
Description: Crystal structure of Hypothetical protein BT0572 from Bacteroides thetaiotaomicron
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
acetolactate synthase activity 14.1096734416761 bayes_pls_golite062009
transferase activity, transferring aldehyde or ketonic groups 12.4176994384119 bayes_pls_golite062009
catalytic activity 0.645256181736122 bayes_pls_golite062009

Predicted Domain #2
Region A:
Residues: [231-304]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGETAPFWRF SAASYPHLVK ESSHETVAEK TKLALTGNGN ASSGGDVYPV EPYNDFKPVL  60
   61 DAHWGMVYDE DSSG

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [305-477]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LRSHTLSLLV ANVPGVLNLI TGAISRRGYN IQSLAVGPAE KEGLSRITTV IPGTDENIDK  60
   61 LVRQLQKLID LQEIQNITHM PFAERELMLI KVAADTSARR DVLDIAQVFR AKAIDVSDHT 120
  121 ITLEVTGDLR KMSALQTQLE AYGICEVART GRVALVRESG VDSTYLRGYS LPL

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 50.045757
Match: 2pc6A
Description: No description for 2pc6A was found.

Predicted functions:

Term Confidence Notes
acetolactate synthase activity 14.1096734416761 bayes_pls_golite062009
transferase activity, transferring aldehyde or ketonic groups 12.4176994384119 bayes_pls_golite062009
catalytic activity 0.645256181736122 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle