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View Structure Prediction Details

Protein: ILVH1_ARATH
Organism: Arabidopsis thaliana
Length: 477 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ILVH1_ARATH.

Description E-value Query
Range
Subject
Range
ILVH2_ARATH - Acetolactate synthase small subunit 2, chloroplastic OS=Arabidopsis thaliana GN=At2g31810 PE=1 SV=1
437.0 [0..5] [477..16]

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Predicted Domain #1
Region A:
Residues: [1-230]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAATTTATSL FSSRLHFQNQ NQGYGFPAKT PNSLQVNQII DGRKMRNATV LSAASTDKAI  60
   61 TTAQSVAPTA CDRVRRHTIS VFVGDESGII NRIAGVFARR GYNIESLAVG LNEDKALFTI 120
  121 VVLGTDKVLQ QVVEQLNKLV NVIKVEDLSK EPHVERELML IKLNADPSTR SEIMWLVDIF 180
  181 RAKIVDTSEQ SLTIEVTGDP GKMVALTTNL EKFGIKEIAR TGKIALRREK 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 7.221849
Match: 2f06A
Description: Crystal structure of Hypothetical protein BT0572 from Bacteroides thetaiotaomicron
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
acetolactate synthase activity 14.1096734416761 bayes_pls_golite062009
transferase activity, transferring aldehyde or ketonic groups 12.4176994384119 bayes_pls_golite062009
catalytic activity 0.645256181736122 bayes_pls_golite062009

Predicted Domain #2
Region A:
Residues: [231-304]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGETAPFWRF SAASYPHLVK ESSHETVAEK TKLALTGNGN ASSGGDVYPV EPYNDFKPVL  60
   61 DAHWGMVYDE DSSG

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [305-477]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LRSHTLSLLV ANVPGVLNLI TGAISRRGYN IQSLAVGPAE KEGLSRITTV IPGTDENIDK  60
   61 LVRQLQKLID LQEIQNITHM PFAERELMLI KVAADTSARR DVLDIAQVFR AKAIDVSDHT 120
  121 ITLEVTGDLR KMSALQTQLE AYGICEVART GRVALVRESG VDSTYLRGYS LPL

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 50.045757
Match: 2pc6A
Description: No description for 2pc6A was found.

Predicted functions:

Term Confidence Notes
acetolactate synthase activity 14.1096734416761 bayes_pls_golite062009
transferase activity, transferring aldehyde or ketonic groups 12.4176994384119 bayes_pls_golite062009
catalytic activity 0.645256181736122 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle