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View Structure Prediction Details

Protein: gi|9757927, gi|1...
Organism: Arabidopsis thaliana
Length: 375 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|9757927, gi|1....

Description E-value Query
Range
Subject
Range
gi|10177081, gi|... - gi|15237918|ref|NP_197810.1| lipase class 3-related [Arabidopsis thaliana], gi|10177081|dbj|BAB10387...
500.0 [0..1] [375..1]
gi|115445589, gi... - gi|50906987|ref|XP_464982.1| lipase class 3-like [Oryza sativa (japonica cultivar-group)], gi|478477...
gi|218190502 - gi|218190502|gb|EEC72929.1| hypothetical protein OsI_06776 [Oryza sativa Indica Group]
413.0 [0..16] [353..1]

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Predicted Domain #1
Region A:
Residues: [1-89]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGRGSLGKLM GGEERASKDT DTFNIFGPFH LTSIDWNNQY HRTSVASSLV NGVYTLEGDR  60
   61 LEEREGSEAL AKPWWEFFHF TLLETLIDD

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [90-267]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DSSIYGAIFE YELYHLYQNT PHVKVPRYVI AFRGTVLKGK TWKFDLKLDL KCIFNTLHQG  60
   61 GRSMYAINVI RRMVDKHNHS AIWLAGHSLG AALVLLAGKT MKISGFLLES YIFNPPISSI 120
  121 PLEQLPGGDI IKGLFQITKS VVKATVAMAL TDLQVPKDDP KTASWIPYLY VNPADPIC

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 23.69897
Match: 1lgyA
Description: Triacylglycerol lipase
Matching Structure (courtesy of the PDB):

Predicted Domain #3
Region A:
Residues: [268-375]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 AGYIDYFRHK TFMSEIGASH IERIGARKSV RSLLVGRRGK LSPSDLSSEP LHLLPSADMT  60
   61 VNKNKPTKST TAHGLHQWWE RDSTLRENWE SCCIRPYHEG KLEQLTIQ

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle