| Protein: | gi|9757927, gi|1... |
| Organism: | Arabidopsis thaliana |
| Length: | 375 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|9757927, gi|1....
| Description | E-value | Query Range |
Subject Range |
|
|
500.0 | [0..1] | [375..1] |
|
|
413.0 | [0..16] | [353..1] |
|
Region A: Residues: [1-89] |
1 11 21 31 41 51
| | | | | |
1 MGRGSLGKLM GGEERASKDT DTFNIFGPFH LTSIDWNNQY HRTSVASSLV NGVYTLEGDR 60
61 LEEREGSEAL AKPWWEFFHF TLLETLIDD
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.675 | d.68.1 | Translation initiation factor IF3, C-terminal domain |
| View | Download | 0.597 | a.29.16 | Description not found. |
| View | Download | 0.585 | a.2.2 | Ribosomal protein L29 (L29p) |
| View | Download | 0.579 | d.6.1 | Prion-like |
| View | Download | 0.579 | d.6.1 | Prion-like |
| View | Download | 0.570 | a.13.1 | alpha-2-Macroglobulin receptor associated protein (RAP) domain 1 |
| View | Download | 0.544 | a.2.2 | Ribosomal protein L29 (L29p) |
| View | Download | 0.459 | a.2.11 | Fe,Mn superoxide dismutase (SOD), N-terminal domain |
| View | Download | 0.421 | a.7.8 | GAT domain |
| View | Download | 0.413 | a.16.1 | S15/NS1 RNA-binding domain |
| View | Download | 0.380 | a.278.1 | Description not found. |
| View | Download | 0.369 | a.7.8 | GAT domain |
| View | Download | 0.361 | a.7.8 | GAT domain |
|
Region A: Residues: [90-267] |
1 11 21 31 41 51
| | | | | |
1 DSSIYGAIFE YELYHLYQNT PHVKVPRYVI AFRGTVLKGK TWKFDLKLDL KCIFNTLHQG 60
61 GRSMYAINVI RRMVDKHNHS AIWLAGHSLG AALVLLAGKT MKISGFLLES YIFNPPISSI 120
121 PLEQLPGGDI IKGLFQITKS VVKATVAMAL TDLQVPKDDP KTASWIPYLY VNPADPIC
|
| Detection Method: | |
| Confidence: | 23.69897 |
| Match: | 1lgyA |
| Description: | Triacylglycerol lipase |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [268-375] |
1 11 21 31 41 51
| | | | | |
1 AGYIDYFRHK TFMSEIGASH IERIGARKSV RSLLVGRRGK LSPSDLSSEP LHLLPSADMT 60
61 VNKNKPTKST TAHGLHQWWE RDSTLRENWE SCCIRPYHEG KLEQLTIQ
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.485 | d.58.4 | Dimeric alpha+beta barrel |
| View | Download | 0.447 | d.58.7 | RNA-binding domain, RBD |
| View | Download | 0.447 | d.58.7 | RNA-binding domain, RBD |
| View | Download | 0.433 | d.44.1 | Fe,Mn superoxide dismutase (SOD), C-terminal domain |
| View | Download | 0.391 | g.52.1 | Inhibitor of apoptosis (IAP) repeat |
| View | Download | 0.387 | d.58.4 | Dimeric alpha+beta barrel |
| View | Download | 0.387 | d.58.4 | Dimeric alpha+beta barrel |
| View | Download | 0.372 | b.55.1 | PH domain-like |
| View | Download | 0.352 | d.17.1 | Cystatin/monellin |
| View | Download | 0.329 | d.58.7 | RNA-binding domain, RBD |
| View | Download | 0.290 | a.74.1 | Cyclin-like |
| View | Download | 0.259 | b.55.1 | PH domain-like |
| View | Download | 0.243 | d.360.1 | Description not found. |
| View | Download | 0.226 | a.74.1 | Cyclin-like |
