| Protein: | ORTH1_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 617 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ORTH1_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
496.0 | [0..1] | [617..1] |
|
Region A: Residues: [1-89] |
1 11 21 31 41 51
| | | | | |
1 MAIETQLPCD GDGVCMRCQV NPPSEETLTC GTCVTPWHVP CLLPESLASS TGEWECPDCS 60
61 GVVVPSAAPG TGNARPESSG SVLVAAIRA
|
| Detection Method: |  |
| Confidence: | 3.08 |
| Match: | 2e6rA |
| Description: | No description for 2e6rA was found. |
|
Region A: Residues: [90-250] |
1 11 21 31 41 51
| | | | | |
1 IQADETLTEA EKAKKRQKLM SGGGDDGVDE EEKKKLEIFC SICIQLPERP ITTPCGHNFC 60
61 LKCFEKWAVG QGKLTCMICR SKIPRHVAKN PRINLALVSA IRLANVTKCS VEATAAKVHH 120
121 IIRNQDRPEK AFTTERAVKT GKANAASGKF FVTIPRDHFG P
|
| Detection Method: | |
| Confidence: | 7.69897 |
| Match: | 2cklB |
| Description: | No description for 2cklB was found. |
|
Region A: Residues: [251-468] |
1 11 21 31 41 51
| | | | | |
1 IPAENDVTRK QGVLVGESWE DRQECRQWGA HFPHIAGIAG QSAVGAQSVA LSGGYDDDED 60
61 HGEWFLYTGS GGRDLSGNKR INKKQSSDQA FKNMNESLRL SCKMGYPVRV VRSWKEKRSA 120
121 YAPAEGVRYD GVYRIEKCWS NVGVQGSFKV CRYLFVRCDN EPAPWTSDEH GDRPRPLPNV 180
181 PELETAADLF VRKESPSWDF DEAEGRWKWM KSPPVSRM
|
| Detection Method: | |
| Confidence: | 74.187087 |
| Match: | PF02182.8 |
| Description: | No description for PF02182.8 was found. |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [469-617] |
1 11 21 31 41 51
| | | | | |
1 ALDPEERKKN KRAKNTMKAR LLKEFSCQIC REVLSLPVTT PCAHNFCKAC LEAKFAGITQ 60
61 LRERSNGGRK LRAKKNIMTC PCCTTDLSEF LQNPQVNREM MEIIENFKKS EEEADASISE 120
121 EEEEESEPPT KKIKMDNNSV GGSGTSLSA
|
| Detection Method: | |
| Confidence: | 18.09691 |
| Match: | 1rmdA |
| Description: | RAG1 DIMERIZATION DOMAIN |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.0938889867773109 | bayes_pls_golite062009 |
