| Protein: | C3H15_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 308 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for C3H15_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
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223.0 | [0..1] | [308..1] |
|
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133.0 | [0..26] | [304..395] |
|
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129.0 | [0..26] | [304..393] |
|
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129.0 | [0..37] | [286..96] |
|
|
120.0 | [0..35] | [258..4] |
|
|
119.0 | [0..106] | [291..32] |
|
Region A: Residues: [1-146] |
1 11 21 31 41 51
| | | | | |
1 MENKIAPFSY SGSSAGNSSS GGVVSSSLYS DQLYKSTRNI MQQRQDMVNR EALCYTRLHE 60
61 ASLEAEALRL ENTELRSMNL RLKNELNSLI RSSIQNRFDH RSPLRMLSNL SIGGNDADEV 120
121 ENQNRTVNRD DVNDKSPTSV MENEDL
|
| Detection Method: |  |
| Confidence: | 2.42 |
| Match: | 1hjbA |
| Description: | C/ebp beta |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [147-205] |
1 11 21 31 41 51
| | | | | |
1 NRSSLPKSIS VRSNGYSKAS QGGGGAAAQS GKPRGTVTKP GTCGQVSTTQ KVYVRGGGK
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.563 | g.69.1 | Description not found. |
| View | Download | 0.527 | d.241.1 | Description not found. |
| View | Download | 0.527 | g.59.1 | Zinc-binding domain of translation initiation factor 2 beta |
| View | Download | 0.510 | d.76.1 | GYF domain |
| View | Download | 0.497 | g.41.3 | Zinc beta-ribbon |
| View | Download | 0.490 | d.76.1 | GYF domain |
| View | Download | 0.454 | d.76.2 | Description not found. |
| View | Download | 0.446 | b.34.1 | C-terminal domain of transcriptional repressors |
| View | Download | 0.433 | d.76.1 | GYF domain |
| View | Download | 0.335 | d.15.7 | Immunoglobulin-binding domains |
|
Region A: Residues: [206-308] |
1 11 21 31 41 51
| | | | | |
1 KEDQEEEIEV EVYNQGMTKT ELCNKWQETG TCPYGDHCQF AHGIKELRPV IRHPRYKTEV 60
61 CRMVLAGDNC PYGHRCHFRH SLSEQEKLVA AGFKPKSSLK LIT
|
| Detection Method: | |
| Confidence: | 18.0 |
| Match: | 1rgoA |
| Description: | Structural Basis for Recognition of the mRNA Class II AU-Rich Element by the Tandem Zinc Finger Domain of TIS11d |
Matching Structure (courtesy of the PDB): |
|
