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Protein Overview: gi|218197316

General Information:
Name(s) found: gi|218197316 [NCBI NR]
Description(s) found:
  • gi|218197316|gb|EEC79743.1| hypothetical protein OsI_21099 [Oryza sativa Indica Group] [NCBI NR]
    • Organism: Oryza sativa Indica Group
    Length: 343 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQEALLPPAH PGRFYSDFGP KPFGSGDQRL SSPNLLTNGG DLFYGCYSPF SPTRVLSPPP  60
   61 PRRAASFSHC SSSSDSVVDD GDGAGAAAAT EHRLHLAHLA LQYQEMANRF ELCLSHLADA 120
  121 ADEAAALRQE NAELRVANND LACRIAKFGG RQSSAIALAG DLRRLRLPKE QTVPALPPPP 180
  181 QSPPAALMNP VAVPEKQAVL PKSISIRSTG YQKLNQGGKH RVSKPVNVGS QRVFVGIDGA 240
  241 EGGEHKVGVK KEEPPMGGLE FEVYNQGMFK TELCNKWEET GACPYGDQCQ FAHGVAELRP 300
  301 VIRHPRYKTQ VCRMVLAGGV CPYGHRCHFR HSITPADRFS FGH

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..203] MSA 1.179993 View MSA. No confident structure predictions are available.
    2 View Details [204..264] deduced N/A No confident structure predictions are available.
    3 View Details [265..343] PSI-BLAST 19.09691 Structural Basis for Recognition of the mRNA Class II AU-Rich Element by the Tandem Zinc Finger Domain of TIS11d


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle