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View Structure Prediction Details

Protein: gi|25404771, gi|...
Organism: Arabidopsis thaliana
Length: 170 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|25404771, gi|....

Description E-value Query
Range
Subject
Range
gi|85116624 - gi|85116624|ref|XP_965093.1| hypothetical protein NCU02499 [Neurospora crassa OR74A]
gi|32422509, gi|... - gi|38567090|emb|CAE76386.1| conserved hypothetical protein [Neurospora crassa], gi|32422509|ref|XP_3...
155.0 [0..13] [169..20]

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Predicted Domain #1
Region A:
Residues: [1-72]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MANTAAGWSP VLAPIYSPVN TKPINFHFSA SFYKPPRPFY KQQNPISALH RSKTTRVIEV  60
   61 VTPKQRNRSF SV

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [73-170]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 FGSLADDSKL NPDEESNDSA EVASIDIKLP RRSLQVEFTC NSCGERTKRL INRHAYEKGL  60
   61 VFVQCAGCLK HHKLVDNLGL IVEYDFRETS KDLGTDHV

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 25.09691
Match: 2e2zA
Description: No description for 2e2zA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle