| Protein: | SDP1_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 825 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SDP1_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
586.0 | [0..1] | [813..1] |
|
|
541.0 | [0..1] | [802..1] |
|
|
494.0 | [0..1] | [811..1] |
|
|
407.0 | [0..32] | [674..68] |
|
|
401.0 | [0..37] | [812..203] |
|
|
399.0 | [0..27] | [678..64] |
|
|
397.0 | [0..9] | [642..192] |
|
Region A: Residues: [1-227] |
1 11 21 31 41 51
| | | | | |
1 MDISNEASVD PFSIGPSSIM GRTIAFRVLF CRSMSQLRRD LFRFLLHWFL RFKLTVSPFV 60
61 SWFHPRNPQG ILAVVTIIAF VLKRYTNVKI KAEMAYRRKF WRNMMRTALT YEEWAHAAKM 120
121 LEKETPKMNE SDLYDEELVK NKLQELRHRR QEGSLRDIMF CMRADLVRNL GNMCNSELHK 180
181 GRLQVPRHIK EYIDEVSTQL RMVCNSDSEE LSLEEKLSFM HETRHAF
|
| Detection Method: |  |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [228-408] |
1 11 21 31 41 51
| | | | | |
1 GRTALLLSGG ASLGAFHVGV VRTLVEHKLL PRIIAGSSVG SIICAVVASR SWPELQSFFE 60
61 NSLHSLQFFD QLGGVFSIVK RVMTQGALHD IRQLQCMLRN LTSNLTFQEA YDMTGRILGI 120
121 TVCSPRKHEP PRCLNYLTSP HVVIWSAVTA SCAFPGLFEA QELMAKDRSG EIVPYHPPFN 180
181 L
|
| Detection Method: | |
| Confidence: | 4.30103 |
| Match: | 1oxwA |
| Description: | Patatin |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [409-625] |
1 11 21 31 41 51
| | | | | |
1 DPEVGTKSSS GRRWRDGSLE VDLPMMQLKE LFNVNHFIVS QANPHIAPLL RLKDLVRAYG 60
61 GRFAAKLAHL VEMEVKHRCN QVLELGFPLG GLAKLFAQEW EGDVTVVMPA TLAQYSKIIQ 120
121 NPTHVELQKA ANQGRRCTWE KLSAIKSNCG IELALDDSVA ILNHMRRLKK SAERAATATS 180
181 SSHHGLASTT RFNASRRIPS WNVLARENST GSLDDLV
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [626-825] |
1 11 21 31 41 51
| | | | | |
1 TDNNLHASSG RNLSDSETES VELSSWTRTG GPLMRTASAN KFIDFVQSLD IDIALVRGFS 60
61 SSPNSPAVPP GGSFTPSPRS IAAHSDIESN SNSNNLGTST SSITVTEGDL LQPERTSNGF 120
121 VLNVVKRENL GMPSIGNQNT ELPESVQLDI PEKEMDCSSV SEHEEDDNDN EEEHNGSSLV 180
181 TVSSEDSGLQ EPVSGSVIDA
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
