Protein: | BH150_ARATH |
Organism: | Arabidopsis thaliana |
Length: | 211 amino acids |
Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for BH150_ARATH.
Description | E-value | Query Range |
Subject Range |
|
127.0 | [0..6] | [211..97] |
Region A: Residues: [1-125] |
1 11 21 31 41 51 | | | | | | 1 MSSEQGNGSN PSTSPEVEGT KTIPFRRRLQ RGQRVFAPKL MEALRRSRVS SEEAPVRHLS 60 61 RRWRATTAQK VYSLKLYDAL QRSRRSATVR DTADKVLATT ARGATRWSRA ILVSRFGTSL 120 121 RRRRN |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
Region A: Residues: [126-211] |
1 11 21 31 41 51 | | | | | | 1 TKPASALAAA IRGSGGSGRR RKLSAVGNRV RVLGGLVPGC RRTALPELLD ETADYIAALE 60 61 MQVRAMTALS KILSELQPST NLGSAL |
Detection Method: | |
Confidence: | 12.522879 |
Match: | 1am9A |
Description: | SREBP-1a |
Matching Structure (courtesy of the PDB): |
Term | Confidence | Notes |
binding | 1.12507195426228 | bayes_pls_golite062009 |
nucleic acid binding | 0.43204604575196 | bayes_pls_golite062009 |
DNA binding | 0.40884226851256 | bayes_pls_golite062009 |
transcription regulator activity | 0.31759335140578 | bayes_pls_golite062009 |
transcription factor activity | 0.09721565916723 | bayes_pls_golite062009 |