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View Structure Prediction Details

Protein: KASC2_ARATH
Organism: Arabidopsis thaliana
Length: 541 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for KASC2_ARATH.

Description E-value Query
Range
Subject
Range
gi|112419469 - gi|112419469|dbj|BAF02924.1| type I polyketide synthase [Streptomyces halstedii]
489.0 [0..2] [539..3542]

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Predicted Domain #1
Region A:
Residues: [1-127]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVGASSSYAS PLCTWFVAAC MSVSHGGGDS RQAVALQSGG RSRRRRQLSK CSVASGSASI  60
   61 QALVTSCLDF GPCTHYNNNN ALSSLFGSNS VSLNRNQRRL NRAASSGGAM AVMEMEKEAA 120
  121 VNKKPPT

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 11.0
Match: 2ju1A
Description: No description for 2ju1A was found.

Predicted Domain #2
Region A:
Residues: [128-541]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 EQRRVVVTGM GVETSLGHDP HTFYENLLQG NSGISQIENF DCSEFPTRIA GEIKSFSTEG  60
   61 WVAPKLSKRM DKFMLYLLTA GKKALADGGV TDEVMAEFDK TKCGVLIGSA MGGMKVFYDA 120
  121 IEALRISYKK MNPFCVPFAT TNMGSAMLAM DLGWMGPNYS ISTACATSNF CILNSANHII 180
  181 KGEADVMLCG GSDAVIIPIG LGGFVACRAL SQRNNDPTKA SRPWDTNRDG FVMGEGAGVL 240
  241 LLEELEHAKK RGATIYAEFL GGSFTCDAYH MTEPHPDGAG VILCIERALA SAGISKEQIN 300
  301 YINAHATSTH AGDIKEYQAL AHCFGQNPEL KVNSTKSMIG HLLGAAGAVE AVATVQAIRT 360
  361 GWVHPNINLE NPDSGVDTKL LVGPKKERLD IKAALSNSFG FGGHNSSIIF APYK

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 120.0
Match: 1e5mA
Description: Beta-ketoacyl-ACP synthase II
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
transferase activity, transferring acyl groups 4.09204107606289 bayes_pls_golite062009
fatty acid synthase activity 3.79121338118181 bayes_pls_golite062009
3-oxoacyl-[acyl-carrier-protein] synthase activity 3.71249191203055 bayes_pls_golite062009
C-acyltransferase activity 3.27532895419051 bayes_pls_golite062009
transferase activity, transferring acyl groups other than amino-acyl groups 3.14957464437124 bayes_pls_golite062009
acyltransferase activity 3.06879684191353 bayes_pls_golite062009
transferase activity 2.15834234036431 bayes_pls_golite062009
catalytic activity 2.14505178497871 bayes_pls_golite062009
acetyl-CoA C-acyltransferase activity 2.06897329929762 bayes_pls_golite062009
acetyl-CoA C-acetyltransferase activity 1.50839304016514 bayes_pls_golite062009
C-acetyltransferase activity 1.19264084089277 bayes_pls_golite062009
holo-[acyl-carrier-protein] synthase activity 0.800737755066121 bayes_pls_golite062009
fatty-acyl-CoA synthase activity 0.696028474623411 bayes_pls_golite062009
phosphotransferase activity, for other substituted phosphate groups 0.392307675469965 bayes_pls_golite062009
acetyltransferase activity 0.254850076259913 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle