| Protein: | TC120_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 1089 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for TC120_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
842.0 | [0..253] | [1083..10] |
|
Region A: Residues: [1-202] |
1 11 21 31 41 51
| | | | | |
1 MGDGAEIVTR LYGDEKKLAE DGRISELVGS DEVKDNEEEV FEEAIGSQEG LKPESLKTDV 60
61 LQEDFPLASN DEVCDLEETS RNERGVENLK VNYSEIGESH GEVNEQCITT KEADSDLVTL 120
121 KMNDYDHGEV ADADISYGKM ASSLDVVENS EKATSNLATE DVNLENGNTH SSSENGVVSP 180
181 DENKELVAEV ISVSACSVET GS
|
| Detection Method: |  |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [203-301] |
1 11 21 31 41 51
| | | | | |
1 NGIDDEKWEE EIDVSAGMVT EQRNGKTGAE FNSVKIVSGD KSLNDSIEVA AGTLSPLEKS 60
61 SSEEKGETES QNSNGGHDIQ SNKEIVKQQD SSVNIGPEI
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [302-349] |
1 11 21 31 41 51
| | | | | |
1 KESQHMERES EVLSSVSPTE SRSDTAALPP ARPAGLGRAA PLLEPAPR
|
| Detection Method: | |
| Confidence: | 3.522879 |
| Match: | 1xzpB |
| Description: | Structure of the GTP-binding protein TrmE from Thermotoga maritima |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [350-631] |
1 11 21 31 41 51
| | | | | |
1 VTQQPRVNGN VSHNQPQQAE DSTTAETDEH DETREKLQFI RVKFLRLSHR LGQTPHNVVV 60
61 AQVLYRLGLA EQLRGRNGSR VGAFSFDRAS AMAEQLEAAA QDPLDFSCTI MVLGKSGVGK 120
121 SATINSIFDE LKISTDAFQV GTKKVQDIEG FVQGIKVRVI DTPGLLPSWS DQHKNEKILK 180
181 SVRAFIKKSP PDIVLYLDRL DMQSRDSGDM PLLRTITDVF GPSIWFNAIV GLTHAASAPP 240
241 DGPNGTASSY DMFVTQRSHV IQQAIRQAAG DMRLMNPVSL VE
|
| Detection Method: | |
| Confidence: | 19.30103 |
| Match: | 2e87A |
| Description: | No description for 2e87A was found. |
|
Region A: Residues: [632-704] |
1 11 21 31 41 51
| | | | | |
1 NHSACRTNRA GQRVLPNGQV WKPHLLLLSF ASKILAEANA LLKLQDNIPG GQFATRSKAP 60
61 PLPLLLSSLL QSR
|
| Detection Method: | |
| Confidence: | 42.39794 |
| Match: | 1h65A |
| Description: | Chloroplast protein translocon GTPase Toc34 |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [705-809] |
1 11 21 31 41 51
| | | | | |
1 PQAKLPEQQY DDEDDEDDLD ESSDSEEESE YDELPPFKRL TKAEMTKLSK SQKKEYLDEM 60
61 EYREKLFMKR QMKEERKRRK LLKKFAAEIK DMPNGYSENV EEERS
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [810-932] |
1 11 21 31 41 51
| | | | | |
1 EPASVPVPMP DLSLPASFDS DNPTHRYRYL DTSNQWLVRP VLETHGWDHD IGYEGVNAER 60
61 LFVVKDKIPV SFSGQVTKDK KDAHVQLELA SSVKHGEGRS TSLGFDMQNA GKELAYTIRS 120
121 ETR
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [933-1089] |
1 11 21 31 41 51
| | | | | |
1 FNKFRKNKAA AGLSVTLLGD SVSAGLKVED KLIANKRFRM VMSGGAMTSR GDVAYGGTLE 60
61 AQFRDKDYPL GRFLSTLGLS VMDWHGDLAI GGNIQSQVPI GRSSNLIARA NLNNRGAGQV 120
121 SIRVNSSEQL QLAVVALVPL FKKLLTYYSP EQMQYGH
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
