| Protein: | CYP38_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 437 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CYP38_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
355.0 | [0..21] | [437..15] |
|
Region A: Residues: [1-88] |
1 11 21 31 41 51
| | | | | |
1 MAAAFASLPT FSVVNSSRFP RRRIGFSCSK KPLEVRCSSG NTRYTKQRGA FTSLKECAIS 60
61 LALSVGLMVS VPSIALPPNA HAVANPVI
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [89-187] |
1 11 21 31 41 51
| | | | | |
1 PDVSVLISGP PIKDPEALLR YALPIDNKAI REVQKPLEDI TDSLKIAGVK ALDSVERNVR 60
61 QASRTLQQGK SIIVAGFAES KKDHGNEMIE KLEAGMQDM
|
| Detection Method: | |
| Confidence: | 7.69897 |
| Match: | 2cqbA |
| Description: | Solution Structure of the RNA recognition motif in Peptidyl-prolyl cis-trans isomerase E |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.950788308762215 | bayes_pls_golite062009 |
| nucleic acid binding | 0.29562225149076 | bayes_pls_golite062009 |
|
Region A: Residues: [188-437] |
1 11 21 31 41 51
| | | | | |
1 LKIVEDRKRD AVAPKQKEIL KYVGGIEEDM VDGFPYEVPE EYRNMPLLKG RASVDMKVKI 60
61 KDNPNIEDCV FRIVLDGYNA PVTAGNFVDL VERHFYDGME IQRSDGFVVQ TGDPEGPAEG 120
121 FIDPSTEKTR TVPLEIMVTG EKTPFYGSTL EELGLYKAQV VIPFNAFGTM AMAREEFEND 180
181 SGSSQVFWLL KESELTPSNS NILDGRYAVF GYVTDNEDFL ADLKVGDVIE SIQVVSGLEN 240
241 LANPSYKIAG
|
| Detection Method: | |
| Confidence: | 38.0 |
| Match: | 1z81A |
| Description: | Crystal Structure of cyclophilin from Plasmodium yoelii. |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| catalytic activity | 0.218596983141665 | bayes_pls_golite062009 |
