| Protein: | gi|25294084, gi|... |
| Organism: | Arabidopsis thaliana |
| Length: | 320 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|25294084, gi|....
| Description | E-value | Query Range |
Subject Range |
|
|
225.0 | [0..3] | [320..2] |
|
Region A: Residues: [1-132] |
1 11 21 31 41 51
| | | | | |
1 MSNPTRKNME RIKGPWSPEE DDLLQRLVQK HGPRNWSLIS KSIPGRSGKS CRLRWCNQLS 60
61 PEVEHRAFSQ EEDETIIRAH ARFGNKWATI SRLLNGRTDN AIKNHWNSTL KRKCSVEGQS 120
121 CDFGGNGGYD GN
|
| Detection Method: |  |
| Confidence: | 35.154902 |
| Match: | 1a5jA |
| Description: | CHICKEN B-MYB DNA BINDING DOMAIN, REPEAT 2 AND REPEAT3, NMR, 32 STRUCTURES |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.334577365229545 | bayes_pls_golite062009 |
| transcription regulator activity | 0.0696342306231097 | bayes_pls_golite062009 |
|
Region A: Residues: [133-320] |
1 11 21 31 41 51
| | | | | |
1 LGEEQPLKRT ASGGGGVSTG LYMSPGSPSG SDVSEQSSGG AHVFKPTVRS EVTASSSGED 60
61 PPTYLSLSLP WTDETVRVNE PVQLNQNTVM DGGYTAELFP VRKEEQVEVE EEEAKGISGG 120
121 FGGEFMTVVQ EMIRTEVRSY MADLQRGNVG GSSSGGGGGG SCMPQSVNSR RVGFREFIVN 180
181 QIGIGKME
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
