| Protein: | FPG_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 390 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for FPG_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
351.0 | [0..1] | [277..1] |
|
Region A: Residues: [1-278] |
1 11 21 31 41 51
| | | | | |
1 MPELPEVEAA RRAIEENCLG KKIKRVIIAD DNKVIHGISP SDFQTSILGK TIISARRKGK 60
61 NLWLELDSPP FPSFQFGMAG AIYIKGVAVT KYKRSAVKDS EEWPSKYSKF FVELDDGLEL 120
121 SFTDKRRFAK VRLLANPTSV SPISELGPDA LLEPMTVDEF AESLAKKKIT IKPLLLDQGY 180
181 ISGIGNWIAD EVLYQARIHP LQTASSLSKE QCEALHTSIK EVIEKAVEVD ADSSQFPSYW 240
241 IFHNREKKPG KAFVDGKKID FITAGGRTTA YVPELQKL
|
| Detection Method: |  |
| Confidence: | 88.045757 |
| Match: | 1k82A |
| Description: | DNA repair protein MutM (Fpg) |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| DNA N-glycosylase activity | 4.06377793944255 | bayes_pls_golite062009 |
| oxidized base lesion DNA N-glycosylase activity | 3.68895100180378 | bayes_pls_golite062009 |
| hydrolase activity, hydrolyzing N-glycosyl compounds | 3.63831813037192 | bayes_pls_golite062009 |
| oxidized purine base lesion DNA N-glycosylase activity | 3.50273405950314 | bayes_pls_golite062009 |
| DNA-(apurinic or apyrimidinic site) lyase activity | 3.32722481172627 | bayes_pls_golite062009 |
| hydrolase activity | 2.63663177929964 | bayes_pls_golite062009 |
| hydrolase activity, acting on glycosyl bonds | 2.59048389792519 | bayes_pls_golite062009 |
| binding | 1.7313696856499 | bayes_pls_golite062009 |
| DNA binding | 1.22619720972604 | bayes_pls_golite062009 |
| nucleic acid binding | 1.17199530230795 | bayes_pls_golite062009 |
| transcription regulator activity | 1.16376707327858 | bayes_pls_golite062009 |
| protein binding | 1.14219782236887 | bayes_pls_golite062009 |
| transcription factor activity | 0.472763834470731 | bayes_pls_golite062009 |
| carbon-oxygen lyase activity | 0.438176855290553 | bayes_pls_golite062009 |
| catalytic activity | 0.101795606736461 | bayes_pls_golite062009 |
| lyase activity | 0.0836281676510939 | bayes_pls_golite062009 |
|
Region A: Residues: [279-390] |
1 11 21 31 41 51
| | | | | |
1 YGKDAEKAAK VRPAKRGVKP KEDDGDGEED EQETEKEDES AKSKKGQKPR GGRGKKPASK 60
61 TKTEESDDDG DDSEAEEEVV KPKGRGTKPA IKRKSEEKAT SQAGKKPKGR KS
|
| Detection Method: | |
| Confidence: | 1.52 |
| Match: | 2j63A |
| Description: | No description for 2j63A was found. |
