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View Structure Prediction Details

Protein: FHY3_ARATH
Organism: Arabidopsis thaliana
Length: 839 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

No multiple sequence alignment data found for FHY3_ARATH.

Predicted Domain #1
Region A:
Residues: [1-69]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDIDLRLHSG DLCKGDDEDR GLDNVLHNEE DMDIGKIEDV SVEVNTDDSV GMGVPTGELV  60
   61 EYTEGMNLE

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [70-183]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PLNGMEFESH GEAYSFYQEY SRAMGFNTAI QNSRRSKTTR EFIDAKFACS RYGTKREYDK  60
   61 SFNRPRARQS KQDPENMAGR RTCAKTDCKA SMHVKRRPDG KWVIHSFVRE HNHE

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 31.207608
Match: PF03101.7
Description: No description for PF03101.7 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [184-281]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LLPAQAVSEQ TRKIYAAMAK QFAEYKTVIS LKSDSKSSFE KGRTLSVETG DFKILLDFLS  60
   61 RMQSLNSNFF YAVDLGDDQR VKNVFWVDAK SRHNYGSF

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [282-404]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 CDVVSLDTTY VRNKYKMPLA IFVGVNQHYQ YMVLGCALIS DESAATYSWL METWLRAIGG  60
   61 QAPKVLITEL DVVMNSIVPE IFPNTRHCLF LWHVLMKVSE NLGQVVKQHD NFMPKFEKCI 120
  121 YKS

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 28.443697
Match: PF10551.1
Description: No description for PF10551.1 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #5
Region A:
Residues: [405-509]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GKDEDFARKW YKNLARFGLK DDQWMISLYE DRKKWAPTYM TDVLLAGMST SQRADSINAF  60
   61 FDKYMHKKTS VQEFVKVYDT VLQDRCEEEA KADSEMWNKQ PAMKS

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #6
Region A:
Residues: [510-702]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PSPFEKSVSE VYTPAVFKKF QIEVLGAIAC SPREENRDAT CSTFRVQDFE NNQDFMVTWN  60
   61 QTKAEVSCIC RLFEYKGYLC RHTLNVLQCC HLSSIPSQYI LKRWTKDAKS RHFSGEPQQL 120
  121 QTRLLRYNDL CERALKLNEE ASLSQESYNI AFLAIEGAIG NCAGINTSGR SLPDVVTSPT 180
  181 QGLISVEEDN HSR

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #7
Region A:
Residues: [703-839]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SAGKTSKKKN PTKKRKVNPE QDVMPVAAPE SLQQMDKLSP RTVGIESYYG TQQSVQGMVQ  60
   61 LNLMGPTRDN FYGNQQTMQG LRQLNSIAPS YDSYYGPQQG IHGQGVDFFR PANFSYDIRD 120
  121 DPNVRTTQLH EDASRHS

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle